SitesBLAST
Comparing PfGW456L13_3 FitnessBrowser__pseudo13_GW456_L13:PfGW456L13_3 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
3a8uX Crystal structure of omega-amino acid:pyruvate aminotransferase
94% identity, 98% coverage: 10:448/449 of query aligns to 2:440/441 of 3a8uX
- active site: Y145 (= Y153), D252 (= D260), K281 (= K289), Q414 (= Q422)
- binding pyridoxal-5'-phosphate: S111 (= S119), G112 (= G120), S113 (= S121), Y145 (= Y153), H146 (= H154), G147 (= G155), E219 (= E227), D252 (= D260), V254 (= V262), I255 (= I263), K281 (= K289)
Q9I700 Beta-alanine--pyruvate aminotransferase; Beta-A--Py AT; Beta-alanine--pyruvate transaminase; Omega-amino acid aminotransferase; Omega-amino acid AT; Omega-amino acid--pyruvate aminotransferase; Omega-APT; EC 2.6.1.18 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see paper)
79% identity, 100% coverage: 1:448/449 of query aligns to 1:447/448 of Q9I700
- W61 (= W61) binding substrate
- T327 (= T328) binding pyridoxal 5'-phosphate
- R414 (= R415) binding substrate
- Q421 (= Q422) binding substrate
4b98A The structure of the omega aminotransferase from pseudomonas aeruginosa (see paper)
80% identity, 98% coverage: 11:448/449 of query aligns to 4:440/441 of 4b98A
- active site: F17 (≠ Y24), Y146 (= Y153), E219 (= E227), D252 (= D260), I255 (= I263), K281 (= K289), Q414 (= Q422)
- binding pyridoxal-5'-phosphate: G233 (= G241), Q236 (≠ K244), F270 (= F278), G271 (= G279)
- binding 3-[o-phosphonopyridoxyl]--amino-benzoic acid: L53 (= L60), W54 (= W61), F82 (= F89), S112 (= S119), G113 (= G120), S114 (= S121), Y146 (= Y153), H147 (= H154), G148 (= G155), E219 (= E227), S224 (= S232), D252 (= D260), V254 (= V262), I255 (= I263), K281 (= K289), Y319 (= Y327), T320 (= T328), R407 (= R415), Q414 (= Q422)
4uhmA Characterization of a novel transaminase from pseudomonas sp. Strain aac (see paper)
79% identity, 97% coverage: 15:448/449 of query aligns to 2:434/435 of 4uhmA
- active site: F11 (≠ Y24), Y140 (= Y153), E213 (= E227), D246 (= D260), I249 (= I263), K275 (= K289), Q408 (= Q422)
- binding magnesium ion: A91 (≠ T104), D99 (≠ N112)
- binding pyridoxal-5'-phosphate: G107 (= G120), S108 (= S121), Y140 (= Y153), H141 (= H154), G142 (= G155), E213 (= E227), D246 (= D260), V248 (= V262), I249 (= I263), K275 (= K289)
Q9A3Q9 Omega-aminotransferase; Beta-alanine--pyruvate aminotransferase; EC 2.6.1.-; EC 2.6.1.18 from Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15) (Caulobacter crescentus) (see paper)
49% identity, 96% coverage: 17:449/449 of query aligns to 9:439/439 of Q9A3Q9
- V227 (= V235) mutation to G: Decreases activity toward 3-aminobutanoate by 2-fold. Increases activity toward the aromatic beta-amino acid 3-amino-3-phenylpropanoate by 2-fold.
- R260 (= R268) mutation to L: Decreases activity toward 3-aminobutanoate by 30-fold.
- N285 (= N293) mutation to A: Decreases activity toward 3-aminobutanoate by 4-fold. Increases activity toward the aromatic beta-amino acid 3-amino-3-phenylpropanoate by 3-fold.
8wqjA Crystal structure of transaminase from shimia marina
33% identity, 98% coverage: 8:445/449 of query aligns to 8:447/472 of 8wqjA
- binding pyridoxal-5'-phosphate: S121 (= S119), G122 (= G120), S123 (= S121), Y155 (= Y153), H156 (= H154), G157 (= G155), E228 (= E227), D261 (= D260), V263 (= V262), I264 (= I263), K290 (= K289), Y321 (= Y327), T322 (= T328)
6fyqA The crystal structure of a new transaminase from the marine bacterium virgibacillus (see paper)
34% identity, 95% coverage: 23:448/449 of query aligns to 14:438/443 of 6fyqA
- active site: F15 (≠ Y24), Y147 (= Y153), D243 (= D260), K272 (= K289)
- binding pyridoxal-5'-phosphate: G114 (= G120), S115 (= S121), Y147 (= Y153), H148 (= H154), G149 (= G155), E210 (= E227), D243 (= D260), V245 (= V262), I246 (= I263), K272 (= K289)
6io1B Crystal structure of a novel thermostable (s)-enantioselective omega- transaminase from thermomicrobium roseum (see paper)
34% identity, 96% coverage: 20:448/449 of query aligns to 16:446/448 of 6io1B
- active site: L20 (≠ Y24), Y151 (= Y153), D257 (= D260), K286 (= K289)
- binding 4'-deoxy-4'-aminopyridoxal-5'-phosphate: G117 (≠ S119), G118 (= G120), A119 (≠ S121), N122 (≠ A124), Y151 (= Y153), H152 (= H154), D257 (= D260), V259 (= V262), I260 (= I263), K286 (= K289)
6gwiB The crystal structure of halomonas elongata amino-transferase (see paper)
34% identity, 95% coverage: 20:447/449 of query aligns to 14:444/450 of 6gwiB
- active site: F18 (≠ Y24), Y149 (= Y153), D255 (= D260), K284 (= K289)
- binding pyridoxal-5'-phosphate: S115 (= S119), G116 (= G120), S117 (= S121), Y149 (= Y153), H150 (= H154), G151 (= G155), E222 (= E227), D255 (= D260), V257 (= V262), I258 (= I263), K284 (= K289)
5lhaA Amine transaminase crystal structure from an uncultivated pseudomonas species in the pmp-bound form
35% identity, 91% coverage: 21:428/449 of query aligns to 11:426/447 of 5lhaA
- active site: Y146 (= Y153), D253 (= D260), K282 (= K289), T319 (= T328)
- binding 4'-deoxy-4'-aminopyridoxal-5'-phosphate: G113 (= G120), S114 (= S121), Y146 (= Y153), H147 (= H154), G148 (= G155), E220 (= E227), D253 (= D260), K282 (= K289), Y318 (= Y327), T319 (= T328)
5lh9D Amine transaminase crystal structure from an uncultivated pseudomonas species in the plp-bound (internal aldimine) form
35% identity, 96% coverage: 21:449/449 of query aligns to 13:442/449 of 5lh9D