Comparing PfGW456L13_3149 FitnessBrowser__pseudo13_GW456_L13:PfGW456L13_3149 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 1 hits to proteins with known functional sites (download)
A0A0H2ZQB9 Ergothioneine transporter EgtUBC from Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) (see paper)
36% identity, 39% coverage: 132:240/282 of query aligns to 60:168/506 of A0A0H2ZQB9
Sites not aligning to the query:
>PfGW456L13_3149 FitnessBrowser__pseudo13_GW456_L13:PfGW456L13_3149
MSTPDFSSQFDSVVDSSLEWLMDNGESVFDTTNTFLKGVYEGVQWCIAYPPYYVIAIAIA
LIGWRAVGLRFAILTGLALLFCDVIGLWPETVSTLALVLTSTVLALVVAIPLGVLAGLAP
SFDRVVDPFLDLIQTMPPYIYLLPAIALLGYGTATALLATFIVAVPPAMRLTSLGIRMTP
KEFIELGDASGVTGWQMFFKIRLPFAMPSIMAGVNQSLMMAFGMVVIAGIVGSGGLGESI
YGAVRTLDIAKSINAAIAIVILTMILDRLAQSAARSRMGESK
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory