Comparing PfGW456L13_3314 FitnessBrowser__pseudo13_GW456_L13:PfGW456L13_3314 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 2 hits to proteins with known functional sites (download)
P52697 6-phosphogluconolactonase; 6-P-gluconolactonase; Pgl; EC 3.1.1.31 from Escherichia coli (strain K12) (see paper)
29% identity, 77% coverage: 69:368/389 of query aligns to 41:311/331 of P52697
5c2vB Kuenenia stuttgartiensis hydrazine synthase (see paper)
24% identity, 67% coverage: 120:378/389 of query aligns to 15:247/352 of 5c2vB
>PfGW456L13_3314 FitnessBrowser__pseudo13_GW456_L13:PfGW456L13_3314
MRNLWPLLMAGSIGAMGVQVASAEDYQLLVGSYTAGQSQGIYRLAFDSRTGQIDASPLQV
IKSANPSWLTLSKDQRHLFVVNENGPGQTDPVGRVSSFAIDPKTHALSLISQVQSLGNEP
THSSLSIDGSHLFVSNYSVAEDPGGTLAVLPVAADGKLKAVVQMSSHPASRVNPERQASA
HVHSTIPSPDGRYVFANDLGADKVFAYRFDPKANPELPLTPATPAFVQLPPGSGPRHLLF
SADGKHAWLTMEMSAQVAVFDYHDGQLEQTQMVDLAAGQPVSDKAAAALHASADGKFLYV
SNRGTANQLLVFAIDPATGHLSELQRRAVEGDHPREFSLDPSGKFLLIANQKSNQIVVVE
RDARTGLLGKTVQKLPMDAPSDLRFLLRQ
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory