Comparing PfGW456L13_3607 Amino acid ABC transporter, permease protein to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 2 hits to proteins with known functional sites (download)
4ymwC Crystal structure of an amino acid abc transporter with histidines (see paper)
39% identity, 71% coverage: 74:272/281 of query aligns to 15:213/214 of 4ymwC
4ymtC Crystal structure of an amino acid abc transporter complex with arginines (see paper)
39% identity, 71% coverage: 74:272/281 of query aligns to 15:213/215 of 4ymtC
>PfGW456L13_3607 Amino acid ABC transporter, permease protein
MTALNPHPAKTAVAPETETHRFSPLPGFRTRLYLTWAVLFGLCVMFFMSFDLKFSIIAQK
LPNLVGLHLGPDGFLQGAALTLFLCFCSIWLSLLLGFVTALARLSRSAVAFGVASFYASF
FRGTPLLIQILLIYLGLPQLGVVPGAISAGIIALSLNYGAYLSEIFRAGIMAVAPGQREA
AMALGLGPVATFLHIVLPQAMRTIIPPTTSQFISMLKDSSLISVMGVWEVMFLAQSYGRS
SYRYIEMLTTAAVIYWLLSIGLELIQNRLERHYGKGFKHQR
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory