Comparing PfGW456L13_3776 FitnessBrowser__pseudo13_GW456_L13:PfGW456L13_3776 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 8 hits to proteins with known functional sites (download)
2vycA Crystal structure of acid induced arginine decarboxylase from e. Coli (see paper)
49% identity, 97% coverage: 21:761/761 of query aligns to 13:754/755 of 2vycA
P28629 Biodegradative arginine decarboxylase; ADC; EC 4.1.1.19 from Escherichia coli (strain K12) (see paper)
49% identity, 97% coverage: 21:761/761 of query aligns to 13:754/755 of P28629
5xx1G Crystal structure of arginine decarboxylase (adia) from salmonella typhimurium (see paper)
47% identity, 97% coverage: 21:761/761 of query aligns to 14:734/735 of 5xx1G
6q6iA Lysine decarboxylase a from pseudomonas aeruginosa
45% identity, 97% coverage: 13:753/761 of query aligns to 9:737/749 of 6q6iA
6q7lA Inducible lysine decarboxylase (see paper)
40% identity, 97% coverage: 27:761/761 of query aligns to 24:710/711 of 6q7lA
3n75A X-ray crystal structure of the escherichia coli inducible lysine decarboxylase ldci (see paper)
40% identity, 97% coverage: 27:761/761 of query aligns to 24:710/711 of 3n75A
1c4kA Ornithine decarboxylase mutant (gly121tyr) (see paper)
30% identity, 97% coverage: 12:748/761 of query aligns to 3:699/728 of 1c4kA
1ordA Crystallographic structure of a plp-dependent ornithine decarboxylase from lactobacillus 30a to 3.1 angstroms resolution (see paper)
30% identity, 97% coverage: 12:748/761 of query aligns to 3:701/730 of 1ordA
>PfGW456L13_3776 FitnessBrowser__pseudo13_GW456_L13:PfGW456L13_3776
MTEYKHSLGMLALLVSSPPDKRTVFGRALDQLVHDVEGRGVSVLASESLTDAASILRSDP
AIQCVLIRWEMDTSEGHADCTKLLVKLRERNTRVPVFLISDRTTASSIPLLVMQHADDFI
WLPEDTSRFLSGRILAAIERYRQAALPPMFGALVKFARNYEYSWHTPGHAGGTAFLKSTA
GRAFYEFFGENLLRSDLSISVGELGSLLDHSGPIGQGERYAAKVFGAHRTYYVTNGSSMS
NRVILMASVTRNQIALCDRNCHKSAEHAMTLSGAIPTYLVPTRNRYGIIGPILPQTLSAE
GVKAAIANNPLVKQGIDPTPVHAIVTNSTYDGLTYNVTRVEELLGESVDRLHFDEAWYGY
ARFNPLYSGRHAMHGNPADHDKSKPTVFATQSTHKLLAALSQASMIHVRDGRNPIEHARF
NESYMMHASTSPNYAIMASCDVSSAMMEAPSGQILTNESIEEAISFRQVLSRMHNEMVGK
NDWFFTCWQPPTVQVGAAAVPFHEVDPATLKTDPNCWVLHPNAVWHGFGDIEDGYCMLDP
IKVSVLSPGMGDDGSLLASGIPACVVTAYLGRQGIVVEKTTDFTILFLFSIGITKGKWGT
LLNALLDFKRDYDDNAELELCLPDLYNANQHRYAGMGLKDLADEIFAAMKKHKTTANMSQ
AFGTLPKAEFSPVEAYEKLVRNDIELVTLNEAAGRLAATGIVPYPPGIPLLMPGENAGPA
DGPLLAYLKALEAFDKSFPGFTHDTHGIEVEDGVYRMLVLK
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory