Comparing PfGW456L13_84 Urea ABC transporter, ATPase protein UrtD to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
1g6hA Crystal structure of the adp conformation of mj1267, an atp-binding cassette of an abc transporter (see paper)
30% identity, 83% coverage: 49:290/290 of query aligns to 4:254/254 of 1g6hA
1g9xB Characterization of the twinning structure of mj1267, an atp-binding cassette of an abc transporter (see paper)
30% identity, 83% coverage: 49:289/290 of query aligns to 4:253/253 of 1g9xB
1oxvD Crystal structure of glcv, the abc-atpase of the glucose abc transporter from sulfolobus solfataricus (see paper)
33% identity, 77% coverage: 64:286/290 of query aligns to 20:237/353 of 1oxvD
Sites not aligning to the query:
1oxvA Crystal structure of glcv, the abc-atpase of the glucose abc transporter from sulfolobus solfataricus (see paper)
33% identity, 77% coverage: 64:286/290 of query aligns to 20:237/353 of 1oxvA
Sites not aligning to the query:
1oxuA Crystal structure of glcv, the abc-atpase of the glucose abc transporter from sulfolobus solfataricus (see paper)
33% identity, 77% coverage: 64:286/290 of query aligns to 20:237/353 of 1oxuA
Sites not aligning to the query:
Q97UY8 Glucose import ATP-binding protein GlcV; EC 7.5.2.- from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (Sulfolobus solfataricus) (see paper)
33% identity, 77% coverage: 64:286/290 of query aligns to 20:237/353 of Q97UY8
5x40A Structure of a cbio dimer bound with amppcp (see paper)
32% identity, 83% coverage: 49:288/290 of query aligns to 4:239/280 of 5x40A
P04983 Ribose import ATP-binding protein RbsA; EC 7.5.2.7 from Escherichia coli (strain K12) (see paper)
29% identity, 83% coverage: 49:290/290 of query aligns to 4:240/501 of P04983
1ji0A Crystal structure analysis of the abc transporter from thermotoga maritima
29% identity, 83% coverage: 49:289/290 of query aligns to 6:238/240 of 1ji0A
P30750 Methionine import ATP-binding protein MetN; EC 7.4.2.11 from Escherichia coli (strain K12) (see 3 papers)
29% identity, 74% coverage: 62:277/290 of query aligns to 18:228/343 of P30750
Sites not aligning to the query:
7d0aB Acinetobacter mlafedb complex in adp-vanadate trapped vclose conformation (see paper)
30% identity, 78% coverage: 52:278/290 of query aligns to 5:229/263 of 7d0aB
7d08B Acinetobacter mlafedb complex in atp-bound vtrans1 conformation (see paper)
30% identity, 78% coverage: 52:278/290 of query aligns to 5:229/263 of 7d08B
3tuzC Inward facing conformations of the metni methionine abc transporter: cy5 semet soak crystal form (see paper)
28% identity, 74% coverage: 62:277/290 of query aligns to 19:229/344 of 3tuzC
Sites not aligning to the query:
3tuiC Inward facing conformations of the metni methionine abc transporter: cy5 native crystal form (see paper)
28% identity, 74% coverage: 62:277/290 of query aligns to 19:229/344 of 3tuiC
Sites not aligning to the query:
6z5uK Cryo-em structure of the a. Baumannii mlabdef complex bound to appnhp (see paper)
30% identity, 78% coverage: 52:278/290 of query aligns to 3:227/253 of 6z5uK
4yerA Crystal structure of an abc transporter atp-binding protein (tm_1403) from thermotoga maritima msb8 at 2.35 a resolution
28% identity, 78% coverage: 49:273/290 of query aligns to 4:219/285 of 4yerA
6cvlD Crystal structure of the escherichia coli atpgs-bound metni methionine abc transporter in complex with its metq binding protein (see paper)
28% identity, 74% coverage: 62:277/290 of query aligns to 19:229/344 of 6cvlD
Sites not aligning to the query:
6mjpA Lptb(e163q)fgc from vibrio cholerae (see paper)
26% identity, 83% coverage: 49:289/290 of query aligns to 2:235/240 of 6mjpA
P19566 Maltose/maltodextrin import ATP-binding protein MalK; EC 7.5.2.1 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
29% identity, 77% coverage: 50:273/290 of query aligns to 4:217/369 of P19566
Sites not aligning to the query:
P0AAH0 Phosphate import ATP-binding protein PstB; ABC phosphate transporter; Phosphate-transporting ATPase; EC 7.3.2.1 from Escherichia coli (strain K12) (see paper)
28% identity, 76% coverage: 50:269/290 of query aligns to 11:231/257 of P0AAH0
Sites not aligning to the query:
>PfGW456L13_84 Urea ABC transporter, ATPase protein UrtD
MRVTATAEFMLEPAFFPPLEPNRDAGSSRDAIGLGQRAGKGLNTRHGTILTLEDISVSFD
GFRALNNLNLYIGVGELRCIIGPNGAGKTTLMDVITGKTRPSHGKAWFGETLDLTQMSEV
QIAQAGIGRKFQKPTVFEALSVFENLELAQKTDKSVWASLRARLSGEQKDRIAQVLDTIR
LTSSVNRPAGLLSHGQKQFLEIGMLLMQDPQLLLLDEPVAGMTDAETEFTAELFKSLAGK
HSLMVVEHDMGFVGSIADHVTVLHQGSVLAEGSLEQVQDNERVIEVYLGR
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory