SitesBLAST

Comparing RR42_RS10350 FitnessBrowser__Cup4G11:RR42_RS10350 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found no hits to proteins with known functional sites (download)

Query Sequence

>RR42_RS10350 FitnessBrowser__Cup4G11:RR42_RS10350
MDDTYRLEDRYRREAGSVFLTGTQALVRILVEQARADRIAGLKTGGLVSGYRGSPLGGFD
QELWRQRSLLAEYEIRFEPGLNEDLGATMLWGAQQIDAFPGKRVEGVFSMWYGKGPGVDR
TGDVFRNANVLGTSRHGGVLAIAGDDHAAQSSMFPHQTDHVFEGAMMPVLFPASVEEYVE
FGLFGYALSRFSGLWVAFKAITETVESGRSMLIGGAGSARGARFSLPGDIDIPERGFGYD
TGVKWPGQRAELERRLLEERLPAAQAFARANPIDRTIVRPRDARIGIVTVGKAHGDLLAA
LARLGLDEPRLAELGIGLYKIGMTWPIEGEGVRRFASGMRALLVVEEKRSFVERQIQETL
FNVAAPQRPEVFGKRGPNDAPLLPATLEFAPDQLQKALRQFLAYTGVHALPPGNTGSAAA
LPRQPRVIPLSAQLQPDVLTRKPFFCAGCPHNSSTKLPDGSYAAAGIGCHIMALGQGDNT
ATFCQMGGEGVQWVGLSSFSDLPHLFVNLGDGTYQHSGSLAIRQAVAAGTAVTYKILFND
AVAMTGGQPTEGGLTVPRMVAQLIAEGVGKVVLVSDHPQRYWGAKSIPASVEIAHRDALD
DVQRRLRAYRGVSAIVYDQTCAAEKRRRRKRGTLADPVRRVVINPSVCEGCGDCSVQSNC
IAIEPLETPLGRKRAVNQSSCNKDMSCLKGFCPSFVTIEGLQPKRANQRRIQQMEAQWRA
SLPPPAGPAALGALLEHARILVTGVGGTGVVTVGAILAMAAHLEGKGAATLDFTGLAQKN
GAVVSHVQLADRRERIVTARIEACSADVMIGCDAVVAASPDVLARLRKCGTRAVVNSAVA
PTADFVANGDLPISREIHQAAIESVVGAGQAEFFDCTAAAMTLFGDAIATNMMLVGHAYQ
RGWIPLSEMAIARAIELNGAAVELNRRAFLWGRILACEPNALRRTSAAEAQAAQPFELAR
FVAERKRDLSAYQNAAYAERYGRMVAAVAGAEQRIAGEAGLLAEAVARSYYRVLAYKDEY
EVARLHSDPAFARSLESTFDGHGKKTFHMAPPWLTRVDRNTGRRNKIVLSGTVMSPLLRL
LRHGKILRGTPFDPFGRQSDRRIERRMIVECEDDVQLVLRTLSERTLASAAALVGAYAQI
RGFGVIKERNYRSAQADLQKYR

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.