SitesBLAST
Comparing RR42_RS10650 FitnessBrowser__Cup4G11:RR42_RS10650 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 20 (the maximum) hits to proteins with known functional sites (download)
Q89WV5 Acetyl-coenzyme A synthetase; AcCoA synthetase; Acs; Acetate--CoA ligase; Acyl-activating enzyme; EC 6.2.1.1 from Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110) (see paper)
39% identity, 92% coverage: 45:584/588 of query aligns to 72:629/648 of Q89WV5
- G263 (= G226) mutation to I: Loss of activity.
- G266 (= G229) mutation to I: Great decrease in activity.
- K269 (= K232) mutation to G: Great decrease in activity.
- E414 (= E370) mutation to Q: Great decrease in activity.
P27550 Acetyl-coenzyme A synthetase; AcCoA synthetase; Acs; Acetate--CoA ligase; Acyl-activating enzyme; EC 6.2.1.1 from Escherichia coli (strain K12) (see paper)
36% identity, 92% coverage: 45:584/588 of query aligns to 73:632/652 of P27550
- K609 (= K563) modified: N6-acetyllysine; by autocatalysis
Q9NR19 Acetyl-coenzyme A synthetase, cytoplasmic; Acetate--CoA ligase; Acetyl-CoA synthetase; ACS; AceCS; Acetyl-CoA synthetase 1; AceCS1; Acyl-CoA synthetase short-chain family member 2; Acyl-activating enzyme; Propionate--CoA ligase; EC 6.2.1.1; EC 6.2.1.17 from Homo sapiens (Human) (see paper)
36% identity, 89% coverage: 48:570/588 of query aligns to 102:668/701 of Q9NR19
- T363 (= T270) mutation to A: Loss of catlytic activity but no effect on its nuclear translocation upon glucose deprivation. Loss of ability to promote gene transcription for lysosomal biogenesis and autophagy.
- 656:668 (vs. 558:570, 77% identical) Nuclear localization signal
- S659 (= S561) modified: Phosphoserine; by AMPK; mutation to A: No effect on catalytic activity. Loss of AMPK-mediated phosphorylation, interaction with KPNA1 and nuclear translocation upon glucose deprivation. Loss of ability to promote gene transcription for lysosomal biogenesis and autophagy.
- RR 664:665 (= RR 566:567) mutation to AA: No effect on catalytic activity. Loss of interaction with KPNA1 and nuclear translocation upon glucose deprivation. Loss of ability to promote gene transcription for lysosomal biogenesis and autophagy.
Sites not aligning to the query:
- 1:107 Interaction with TFEB
P9WQD1 Acetyl-coenzyme A synthetase; AcCoA synthetase; Acs; Acetate--CoA ligase; Acyl-activating enzyme; EC 6.2.1.1 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see 2 papers)
39% identity, 92% coverage: 45:584/588 of query aligns to 71:638/651 of P9WQD1
- K617 (= K563) modified: N6-acetyllysine; mutation to R: Complete loss of acetyl-coenzyme A synthetase activity.
Q9QXG4 Acetyl-coenzyme A synthetase, cytoplasmic; Acetate--CoA ligase; Acetyl-CoA synthetase; ACS; AceCS; Acetyl-CoA synthetase 1; AceCS1; Acyl-CoA synthetase short-chain family member 2; Acyl-activating enzyme; Propionate--CoA ligase; EC 6.2.1.1; EC 6.2.1.17 from Mus musculus (Mouse) (see paper)
36% identity, 91% coverage: 48:584/588 of query aligns to 102:683/701 of Q9QXG4
- K661 (= K563) modified: N6-acetyllysine
5jrhA Crystal structure of salmonella enterica acetyl-coa synthetase (acs) in complex with camp and coenzyme a (see paper)
36% identity, 92% coverage: 45:584/588 of query aligns to 69:625/640 of 5jrhA
- active site: T260 (= T224), T412 (= T369), E413 (= E370), N517 (≠ K475), R522 (≠ L480), K605 (= K563)
- binding (r,r)-2,3-butanediol: W93 (≠ R69), E140 (= E116), G169 (≠ T145), K266 (≠ T230), P267 (= P231)
- binding adenosine-3',5'-cyclic-monophosphate: G383 (= G343), E384 (= E344), P385 (= P345), T408 (≠ N365), W409 (= W366), W410 (= W367), Q411 (= Q368), T412 (= T369), D496 (= D454), I508 (≠ F466), N517 (≠ K475), R522 (≠ L480)
- binding coenzyme a: F159 (= F135), G160 (≠ S136), G161 (≠ A137), R187 (vs. gap), S519 (≠ A477), R580 (= R538), P585 (≠ A543)
- binding magnesium ion: V533 (≠ M491), H535 (= H493), I538 (≠ V496)
Q8ZKF6 Acetyl-coenzyme A synthetase; AcCoA synthetase; Acs; Acetate--CoA ligase; Acyl-activating enzyme; EC 6.2.1.1 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see 4 papers)
36% identity, 92% coverage: 45:584/588 of query aligns to 73:632/652 of Q8ZKF6
- R194 (vs. gap) mutation to A: Results in a 2-fold reduction in the catalytic efficiency for both ATP and CoA. 2-fold increase in the affinity for ATP and 3-fold reduction for CoA.; mutation to E: Results in a 2-fold reduction in the catalytic efficiency for both ATP and CoA. 2-fold increase in the affinity for ATP and 2-fold reduction for CoA.
- T311 (= T270) binding
- N335 (vs. gap) binding
- A357 (= A313) mutation to V: Results in a 2-fold reduction in the catalytic efficiency for both ATP and CoA. 3-fold increase in the affinity for ATP and 3-fold reduction for CoA.
- D517 (= D471) mutation to G: Results in a 2-fold reduction in the catalytic efficiency for both ATP and CoA. 2-fold increase in the affinity for ATP and 10-fold reduction for CoA.; mutation to P: Results in a 2-fold reduction in the catalytic efficiency for both ATP and CoA. 3-fold reduction in the affinity for ATP and 4.5-fold reduction for CoA.
- S523 (≠ A477) binding
- G524 (= G478) mutation to L: No acetyl-coenzyme A synthetase activity.; mutation to S: Results in a 2-fold reduction in the catalytic efficiency for both ATP and CoA. Almost the same affinity as the wild-type for ATP, but 9-fold reduction in the affinity for CoA.
- R526 (≠ L480) mutation to A: Results in a 2-fold reduction in the catalytic efficiency for both ATP and CoA. 3-fold increase in the affinity for ATP and 4-fold reduction for CoA.
- R584 (= R538) binding ; mutation to A: Results in a 2-fold reduction in the catalytic efficiency for both ATP and CoA. 2-fold increase in the affinity for ATP and 7-fold reduction for CoA.; mutation to E: Results in a 2-fold reduction in the catalytic efficiency for both ATP and CoA. 3-fold increase in the affinity for ATP and 8-fold reduction for CoA.
- K609 (= K563) modified: N6-acetyllysine; by Pat; mutation to A: No acetyl-coenzyme A synthetase activity.
2p20A Acetyl-coa synthetase, r584a mutation (see paper)
36% identity, 92% coverage: 45:584/588 of query aligns to 69:626/641 of 2p20A
- active site: T260 (= T224), T412 (= T369), E413 (= E370), N517 (≠ K475), R522 (≠ L480), K605 (= K563)
- binding adenosine-5'-monophosphate-propyl ester: G383 (= G343), E384 (= E344), P385 (= P345), T408 (≠ N365), W409 (= W366), W410 (= W367), Q411 (= Q368), T412 (= T369), D496 (= D454), I508 (≠ F466), R511 (= R469), R522 (≠ L480)
2p2fA Acetyl-coa synthetase, wild-type with acetate, amp, and coa bound (see paper)
36% identity, 93% coverage: 45:588/588 of query aligns to 68:625/637 of 2p2fA
- active site: T259 (= T224), T411 (= T369), E412 (= E370), N516 (≠ K475), R521 (≠ L480), K604 (= K563)
- binding adenosine monophosphate: G382 (= G343), E383 (= E344), P384 (= P345), T407 (≠ N365), W408 (= W366), W409 (= W367), Q410 (= Q368), T411 (= T369), D495 (= D454), I507 (≠ F466), R510 (= R469), N516 (≠ K475), R521 (≠ L480)
- binding coenzyme a: F158 (= F135), R186 (vs. gap), W304 (= W268), T306 (= T270), P329 (vs. gap), A352 (= A313), A355 (= A316), S518 (≠ A477), R579 (= R538), P584 (≠ A543)
1pg3A Acetyl coa synthetase, acetylated on lys609 (see paper)
36% identity, 89% coverage: 45:570/588 of query aligns to 69:612/634 of 1pg3A
- active site: T260 (= T224), T412 (= T369), E413 (= E370), N517 (≠ K475), R522 (≠ L480), K605 (= K563)
- binding coenzyme a: F159 (= F135), G160 (≠ S136), R187 (vs. gap), R190 (vs. gap), A301 (= A264), T307 (= T270), P330 (vs. gap), A356 (= A316), S519 (≠ A477), R580 (= R538), P585 (≠ A543)
- binding magnesium ion: V533 (≠ M491), H535 (= H493), I538 (≠ V496)
- binding adenosine-5'-monophosphate-propyl ester: G383 (= G343), E384 (= E344), P385 (= P345), T408 (≠ N365), W409 (= W366), W410 (= W367), Q411 (= Q368), T412 (= T369), D496 (= D454), R511 (= R469), R522 (≠ L480)
8sf3A Crystal structure of acetyl-coenzyme a synthetase from leishmania infantum (amp, acetate and coa bound)
36% identity, 92% coverage: 44:584/588 of query aligns to 78:644/662 of 8sf3A
- binding adenosine monophosphate: G398 (= G343), E399 (= E344), P400 (= P345), T423 (≠ N365), W424 (= W366), Q426 (= Q368), T427 (= T369), D511 (= D454), R526 (= R469), R537 (≠ L480)
- binding coenzyme a: F171 (= F135), G172 (≠ S136), G173 (≠ A137), R199 (vs. gap), K202 (vs. gap), R595 (= R538), P600 (≠ A543)
8u2rA Crystal structure of acetyl-coenzyme a synthetase from leishmania infantum (ethyl amp bound)
35% identity, 92% coverage: 44:584/588 of query aligns to 77:646/664 of 8u2rA
- binding 5'-O-[(S)-ethoxy(hydroxy)phosphoryl]adenosine: I323 (≠ V269), G400 (= G343), E401 (= E344), P402 (= P345), T425 (≠ N365), W426 (= W366), W427 (= W367), Q428 (= Q368), T429 (= T369), D513 (= D454), I525 (≠ F466), R528 (= R469), R539 (≠ L480)
P78773 Probable acetyl-coenzyme A synthetase; Acetate--CoA ligase; Acyl-activating enzyme; EC 6.2.1.1 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
35% identity, 92% coverage: 44:584/588 of query aligns to 82:641/662 of P78773
- T596 (≠ R540) modified: Phosphothreonine
Q99NB1 Acetyl-coenzyme A synthetase 2-like, mitochondrial; Acetate--CoA ligase 2; Acetyl-CoA synthetase 2; AceCS2; Acyl-CoA synthetase short-chain family member 1; Propionate--CoA ligase; EC 6.2.1.1; EC 6.2.1.17 from Mus musculus (Mouse) (see paper)
35% identity, 92% coverage: 45:585/588 of query aligns to 99:659/682 of Q99NB1
- K635 (= K563) modified: N6-acetyllysine
Q9NUB1 Acetyl-coenzyme A synthetase 2-like, mitochondrial; Acetate--CoA ligase 2; Acetyl-CoA synthetase 2; AceCS2; Acyl-CoA synthetase short-chain family member 1; Propionate--CoA ligase; EC 6.2.1.1; EC 6.2.1.17 from Homo sapiens (Human) (see 3 papers)
35% identity, 92% coverage: 45:585/588 of query aligns to 106:666/689 of Q9NUB1
- V488 (≠ I412) to M: in dbSNP:rs6050249
- K642 (= K563) modified: N6-acetyllysine; mutation to Q: Loss of activity.
Sites not aligning to the query:
- 1:37 modified: transit peptide, Mitochondrion
5k8fA Crystal structure of acetyl-coa synthetase in complex with atp and acetyl-amp from cryptococcus neoformans h99
35% identity, 91% coverage: 43:578/588 of query aligns to 89:646/656 of 5k8fA
- active site: T280 (= T224), T432 (= T369), E433 (= E370), N539 (≠ K475), R544 (≠ L480), K631 (= K563)
- binding [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] ethanoate: W325 (= W268), I326 (≠ V269), G403 (= G343), E404 (= E344), P405 (= P345), T428 (≠ N365), Y429 (≠ W366), W430 (= W367), M431 (≠ Q368), T432 (= T369), D518 (= D454), I530 (≠ F466), R533 (= R469), K631 (= K563)
- binding adenosine-5'-triphosphate: T280 (= T224), S281 (= S225), G282 (= G226), S283 (≠ T227), T284 (= T228), K288 (= K232), G403 (= G343), E404 (= E344), P405 (= P345), T428 (≠ N365), Y429 (≠ W366), M431 (≠ Q368), T432 (= T369), D518 (= D454), I530 (≠ F466), R533 (= R469), K631 (= K563)
7l4gB Crystal structure of acetyl-coa synthetase in complex with acetyl adenylate from cryptococcus neoformans h99
35% identity, 91% coverage: 43:580/588 of query aligns to 89:646/668 of 7l4gB
- active site: T280 (= T224), T432 (= T369), E433 (= E370), N539 (≠ K475), R544 (≠ L480), K631 (= K563)
- binding [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] ethanoate: W325 (= W268), G403 (= G343), E404 (= E344), P405 (= P345), T428 (≠ N365), Y429 (≠ W366), W430 (= W367), M431 (≠ Q368), T432 (= T369), D518 (= D454), I530 (≠ F466), R533 (= R469)
5u29A Crystal structure of cryptococcus neoformans h99 acetyl-coa synthetase in complex with ac-ams
35% identity, 91% coverage: 43:580/588 of query aligns to 89:646/668 of 5u29A
- active site: T280 (= T224), T432 (= T369), E433 (= E370), N539 (≠ K475), R544 (≠ L480), K631 (= K563)
- binding 5'-O-(acetylsulfamoyl)adenosine: W325 (= W268), G403 (= G343), E404 (= E344), P405 (= P345), T428 (≠ N365), Y429 (≠ W366), W430 (= W367), M431 (≠ Q368), T432 (= T369), D518 (= D454), I530 (≠ F466), R533 (= R469)
7kdnA Crystal structure of acetyl-coa synthetase in complex with adenosine- 5'-propylphosphate from aspergillus fumigatus
35% identity, 90% coverage: 44:570/588 of query aligns to 81:619/622 of 7kdnA
- active site: T271 (= T224), T422 (= T369), E423 (= E370), N529 (≠ K475), R534 (≠ L480), K612 (= K563)
- binding adenosine-5'-monophosphate-propyl ester: G393 (= G343), E394 (= E344), P395 (= P345), T418 (≠ N365), Y419 (≠ W366), W420 (= W367), Q421 (= Q368), T422 (= T369), D508 (= D454), I520 (≠ F466), R523 (= R469), R534 (≠ L480)
P52910 Acetyl-coenzyme A synthetase 2; Acetate--CoA ligase 2; Acyl-activating enzyme 2; EC 6.2.1.1 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see paper)
34% identity, 92% coverage: 44:584/588 of query aligns to 87:660/683 of P52910
- K506 (≠ G447) modified: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)
Query Sequence
>RR42_RS10650 FitnessBrowser__Cup4G11:RR42_RS10650
MESSSIIHKTASDLRLAPNLGDYEAERRVFSWAAVSRELADQPQGALNIAWQAVDRHAAS
SLRGKAAFRILARGTPTHFVTYGQLSALTNRFCNVLRDLGVGKGERLFILAGRIPELYIA
ILGSLKNGTAVSPLFSAFGPDPIATRVNLGEGAVLVTTDMLFERKIAKWRDRMPSLKHVL
LVAEDGGTTAVPGTLDLSSLMASASDACEITPTTAEDMALLHFTSGTTGTPKGAVHVHGA
VLTHWSTGRYALDLHVDDIYWCTADPGWVTGTSYGVIAPLLHGVTSIVDREEFDAERWYA
ILQDEGVSIWYTAPTAIRMLMKAGADIAKKYAFPRLRFAASVGEPLNPEAVWWGKQVLGL
PFHDNWWQTETGGIMIANTPAFDIKPGSMGRPLPGVEAAIVSRQADGSVQVIEAPNKEGE
LALKRGWPSMFRGYLNSEERYRKSFSGEWYLTGDLARRDADGYYWFVGRADDVIKSAGHL
IGPFEVESALMEHPAVAEAAVIGKPDPIAGEVVKAFVSLNNGFEQSEALRMALLGHARTR
LGAAVAPKEIAFLTQLPRTRSGKIMRRLLKARELGLPEGDTSTLEAGP
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SitesBLAST's Database
SitesBLAST's database includes
(1) SwissProt
entries with experimentally-supported functional features;
and (2) protein structures with bound ligands, from the
BioLip database.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory