SitesBLAST

Comparing RR42_RS11980 FitnessBrowser__Cup4G11:RR42_RS11980 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found no hits to proteins with known functional sites (download)

Query Sequence

>RR42_RS11980 FitnessBrowser__Cup4G11:RR42_RS11980
MTQLSTPANGESAVPATAATQEAVRTPWTEFWRKFRKQHLALGAGVFVLLLVAVAVLAPH
LVPYDPENFFDYDALNAGPSAAHWFGVDSLGRDIFSRILAGARISLAAGFFSVIIGAIVG
TVLGLLAGYYEGWWDRIVMRISDVLFAFPGILLAIGIVAILGNGMTNVIFAVAVFSIPAF
ARLVRGNTLMLKRLTYVEAARSIGASDFTILMRHILPGTISSIVVYFSMRIGTSIITAAS
LSFLGLGAQPPTPEWGAMLNEARADMVTAPHVAIFPSLAIFLTVLAFNLLGDGLRDALDP
KIDRR

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.