SitesBLAST

Comparing RR42_RS16970 RR42_RS16970 ABC transporter ATP-binding protein to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found no hits to proteins with known functional sites (download)

Query Sequence

>RR42_RS16970 RR42_RS16970 ABC transporter ATP-binding protein
MNTPIPSPAAQAAPLTKTPAKTMAALLGFLIIALCAPFLVQTLGGNYWVRVLDFALIYIM
LALGLNIVVGFAGLLDLGYIAFYAVGAYMMALLGSPHLANQFEWIHQLFPNGLHLSMWFV
LPLAVLVAATFGVLLGAPTLKLRGDYLAIVTLGFGEIIRIFLNNLDRPLNITNGPKGITA
VDPVHIFGFDFSKSHEIFGLKFTPVFMYYYLLVVLVIAIVFICLRLQNSRIGRAFVAIRE
DEIAAKAMGINTRNIKLLAFAMGASFGGASGAVFGAFQGFVSPESFVLWESIYILAIVVL
GGMGHIPGVILGGILLVGFQELLRAVAEPAQNMIFGHTIVDAEVLRQLLFGLALVGVMLY
RPAGLWPSPRKEDRPVIRRPGSVGRF

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.