Comparing RR42_RS26650 FitnessBrowser__Cup4G11:RR42_RS26650 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 1 hits to proteins with known functional sites (download)
6u7lA 2.75 angstrom crystal structure of galactarate dehydratase from escherichia coli. (see paper)
34% identity, 97% coverage: 3:493/507 of query aligns to 3:447/460 of 6u7lA
>RR42_RS26650 FitnessBrowser__Cup4G11:RR42_RS26650
MNTAALIRLHANDNVLIARDALSLGQRLPELGLRVRAQVPAGHKIAACAIAKGTQIRKFD
TVIGVAERDIEAGDHVHSHNLALVDFYRDPGFCQDVRPVDYVPEAERATFMGFVRPDGRV
GTRNFIGILSSVNCSATVIRHIADHFTPERMAAYPNVDGVAAFAQSSGCGMSSPSEHFDV
LRRTLAGYARHPNLAGVLIVGLGCERNQVAGLMESQGLVPGSHVRTMVMQDSGGTAATIQ
AGIRAIEAMLPGANTATRQPVPASHLKIGLECGGSDGFSGISANPALGAAMDILVRHGGT
AILSETPEIHGVEYMLTRRAVTPEVGQKLLDRLAWWERYTAGQNAQFNGVVGHGNQQGGL
ANIFEKSLGSAMKGGTTPLQAVYEYAEPIEQSGFVFMDSPGYDPVAATGQIASGANLICF
TTGRGSMFGSKPAPTIKLASNTPMYTRLEGDMDINCGLVLDGELTVDEMGQRIFEHILEA
ASGHPTKSEALGLGDNEFVPWHLGIVS
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory