Comparing RR42_RS35305 FitnessBrowser__Cup4G11:RR42_RS35305 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
Q02635 Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.79 from Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti) (see paper)
57% identity, 99% coverage: 1:398/401 of query aligns to 1:398/400 of Q02635
6f77A Crystal structure of the prephenate aminotransferase from rhizobium meliloti (see paper)
57% identity, 99% coverage: 4:398/401 of query aligns to 3:397/399 of 6f77A
P58350 Aspartate aminotransferase; AAT; AspAT; Putative 2-aminoadipate transaminase; Transaminase A; EC 2.6.1.1; EC 2.6.1.39 from Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti) (see paper)
52% identity, 98% coverage: 7:399/401 of query aligns to 17:409/410 of P58350
6f35A Crystal structure of the aspartate aminotranferase from rhizobium meliloti (see paper)
52% identity, 98% coverage: 7:399/401 of query aligns to 7:399/400 of 6f35A
8wkjA The crystal structure of aspartate aminotransferases lpg0070 from legionella pneumophila (see paper)
45% identity, 98% coverage: 2:393/401 of query aligns to 3:387/391 of 8wkjA
1j32A Aspartate aminotransferase from phormidium lapideum
41% identity, 98% coverage: 2:393/401 of query aligns to 1:381/388 of 1j32A
5wmhA Arabidopsis thaliana prephenate aminotransferase (see paper)
40% identity, 99% coverage: 3:399/401 of query aligns to 1:399/399 of 5wmhA
5wmlA Arabidopsis thaliana prephenate aminotransferase mutant- k306a (see paper)
40% identity, 99% coverage: 2:399/401 of query aligns to 1:400/404 of 5wmlA
5wmiA Arabidopsis thaliana prephenate aminotransferase mutant- t84v (see paper)
40% identity, 99% coverage: 2:399/401 of query aligns to 1:399/402 of 5wmiA
1bkgA Aspartate aminotransferase from thermus thermophilus with maleate (see paper)
41% identity, 98% coverage: 1:392/401 of query aligns to 1:378/382 of 1bkgA
1bjwA Aspartate aminotransferase from thermus thermophilus (see paper)
41% identity, 98% coverage: 1:392/401 of query aligns to 1:378/382 of 1bjwA
Q56232 Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) (see 3 papers)
41% identity, 98% coverage: 1:392/401 of query aligns to 1:378/385 of Q56232
1b5oA Thermus thermophilus aspartate aminotransferase single mutant 1 (see paper)
41% identity, 98% coverage: 1:392/401 of query aligns to 1:378/382 of 1b5oA
1gc4A Thermus thermophilus aspartate aminotransferase tetra mutant 2 complexed with aspartate (see paper)
41% identity, 98% coverage: 1:392/401 of query aligns to 1:378/382 of 1gc4A
1gc3A Thermus thermophilus aspartate aminotransferase tetra mutant 2 complexed with tryptophan (see paper)
41% identity, 98% coverage: 1:392/401 of query aligns to 1:378/382 of 1gc3A
1gdeA Crystal structure of pyrococcus protein a-1 e-form (see paper)
35% identity, 98% coverage: 3:393/401 of query aligns to 1:379/388 of 1gdeA
1gd9A Crystall structure of pyrococcus protein-a1 (see paper)
35% identity, 98% coverage: 3:393/401 of query aligns to 1:379/388 of 1gd9A
1o4sB Crystal structure of aspartate aminotransferase (tm1255) from thermotoga maritima at 1.90 a resolution (see paper)
35% identity, 97% coverage: 4:393/401 of query aligns to 10:379/384 of 1o4sB
P14909 Aspartate aminotransferase; AspAT; Transaminase A; EC 2.6.1.1 from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (Sulfolobus solfataricus) (see 3 papers)
29% identity, 92% coverage: 33:400/401 of query aligns to 37:399/402 of P14909
Sites not aligning to the query:
1xi9C Alanine aminotransferase from pyrococcus furiosus pfu-1397077-001
31% identity, 92% coverage: 24:393/401 of query aligns to 21:387/393 of 1xi9C
>RR42_RS35305 FitnessBrowser__Cup4G11:RR42_RS35305
MLSLTDRLNRIKPSPSSMAGQRVRELRAAGRDVIGLTAGEPDFETPAHIREAAWRAMQAG
KTRYTDVGGTAELRHAAAQKFKRENGLDYAASEIIVSTGAKQVIFNALMCTVQQGDEVIV
PAPYWVSYPDITLFAGGVPVFVACQAENGFKLTPEELERAISARTRWLILNSPNNPSGAA
YTRTELVAIAEVLERHPHVWVMTDDIYEHLTYDGAAFVTLAQAAPSLKARTLTINGVSKA
YAMTGWRIGYAGAPAPLIKAMVKLQSQSTSGANAVAQAAAIAALDGPQDFIAANKAVFQA
RRDRVVAALGQVDGIHCQAPAGAFYVFASCEALIGARTPHGSVIRSSDDWVNWVLDSQDL
AVLQGSAYGVDTHFRLSFAASMAQLDEGCRRIEAAAAALIR
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory