Comparing SM_b20423 FitnessBrowser__Smeli:SM_b20423 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
3gjuA Crystal structure of a putative aminotransferase (mll7127) from mesorhizobium loti maff303099 at 1.55 a resolution
84% identity, 100% coverage: 1:456/458 of query aligns to 2:457/458 of 3gjuA
3fcrA Crystal structure of putative aminotransferase (yp_614685.1) from silicibacter sp. Tm1040 at 1.80 a resolution
71% identity, 99% coverage: 4:457/458 of query aligns to 4:458/458 of 3fcrA
5kr6B Directed evolution of transaminases by ancestral reconstruction. Using old proteins for new chemistries
68% identity, 98% coverage: 5:455/458 of query aligns to 6:456/460 of 5kr6B
5kr3A Directed evolution of transaminases by ancestral reconstruction. Using old proteins for new chemistries
62% identity, 99% coverage: 2:455/458 of query aligns to 2:453/458 of 5kr3A
5kquC Directed evolution of transaminases by ancestral reconstruction. Using old proteins for new chemistries
63% identity, 99% coverage: 6:457/458 of query aligns to 5:456/459 of 5kquC
5kr5A Directed evolution of transaminases by ancestral reconstruction. Using old proteins for new chemistries
61% identity, 98% coverage: 6:455/458 of query aligns to 3:452/455 of 5kr5A
5ghgB Transaminase w58l with smba
45% identity, 98% coverage: 6:455/458 of query aligns to 2:427/433 of 5ghgB
6g4dB Crystal structure of the omega transaminase from pseudomonas jessenii in complex with plp (see paper)
43% identity, 98% coverage: 6:455/458 of query aligns to 1:449/453 of 6g4dB
6g4fA Crystal structure of the omega transaminase from pseudomonas jessenii in complex with pmp (see paper)
43% identity, 98% coverage: 6:455/458 of query aligns to 1:449/451 of 6g4fA
6g4eA Crystal structure of the omega transaminase from pseudomonas jessenii in complex with plp and 6-aminohexanoate (6-aca) (see paper)
43% identity, 98% coverage: 6:455/458 of query aligns to 1:449/451 of 6g4eA
D6R3B6 Vanillin aminotransferase; Putative aminotransferase; pAMT; EC 2.6.1.119 from Capsicum frutescens (Cayenne pepper) (Tabasco pepper) (see paper)
42% identity, 92% coverage: 35:455/458 of query aligns to 29:451/459 of D6R3B6
Q94CE5 Gamma-aminobutyrate transaminase POP2, mitochondrial; AtGABA-T; Gamma-aminobutyric acid aminotransferase 1; Protein HEXENAL RESPONSE 1; Protein POLLEN-PISTIL INCOMPATIBILITY 2; AtPOP2; EC 2.6.1.96 from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
42% identity, 90% coverage: 35:445/458 of query aligns to 72:481/504 of Q94CE5
6io1B Crystal structure of a novel thermostable (s)-enantioselective omega- transaminase from thermomicrobium roseum (see paper)
42% identity, 99% coverage: 5:456/458 of query aligns to 5:447/448 of 6io1B
6gwiB The crystal structure of halomonas elongata amino-transferase (see paper)
43% identity, 97% coverage: 4:448/458 of query aligns to 2:438/450 of 6gwiB
7qx3A Structure of the transaminase tr2e2 with eos (see paper)
41% identity, 92% coverage: 33:452/458 of query aligns to 1:414/422 of 7qx3A
7qx0B Transaminase structure of plurienzyme (tr2e2) in complex with plp (see paper)
40% identity, 96% coverage: 12:452/458 of query aligns to 9:435/443 of 7qx0B
6s54A Transaminase from pseudomonas fluorescens (see paper)
38% identity, 95% coverage: 10:446/458 of query aligns to 6:442/453 of 6s54A
6s4gA Crystal structure of the omega transaminase from chromobacterium violaceum in complex with pmp (see paper)
38% identity, 97% coverage: 12:454/458 of query aligns to 9:443/453 of 6s4gA
7q9xAAA Probable aminotransferase
38% identity, 97% coverage: 12:454/458 of query aligns to 10:444/455 of 7q9xAAA
4a6tC Crystal structure of the omega transaminase from chromobacterium violaceum in complex with plp (see paper)
38% identity, 97% coverage: 12:454/458 of query aligns to 10:444/455 of 4a6tC
>SM_b20423 FitnessBrowser__Smeli:SM_b20423
MLERSNELTAWDRDHFFHPSTHMGMHARGETPTRVIGGGEGVYITDISGKRSLDAFAGLY
CVNVGYGRQKIADAIAEQAKNLAYYHAYVGHGTEASIRLSKMIIDRAPEGMSRVYFGLSG
SDANETNIKLIWYYNNILGRPEKKKIISRWRGYHGSGVMTGSLTGLHLFHNAFDLPRAPI
LHTEAPYYFRRPDRSMSEEQFSQYCADKLEEMILAEGPDTVAAFIGEPILGTGGIVPPPK
GYWEKIQAVLQKYDILLVADEVVTGFGRLGTMFGSDHYGIKPDLITIAKGLTSAYAPLSG
TIVSDKLWQVLVKGSDELGAIGHGWTYSAHPICAAAGIANLELIDELGIVENAGSTGAYF
RAELQKAVGDHRHVGEVRGDGLMAAIEFVEDRDDRAFFDPGRKVGPQVAAALLERGVIGR
AMPQGDILGFAPPLCLTRDEADIVVKAAADTIQSVLGR
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory