Comparing SM_b20890 FitnessBrowser__Smeli:SM_b20890 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 12 hits to proteins with known functional sites (download)
B5ZZ34 L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum bv. trifolii (strain WSM2304) (see 2 papers)
75% identity, 100% coverage: 1:579/579 of query aligns to 1:579/579 of B5ZZ34
5j85A Ser480ala mutant of l-arabinonate dehydratase (see paper)
75% identity, 99% coverage: 4:579/579 of query aligns to 1:576/576 of 5j85A
8ej0A Crystal structure of fe-s cluster-dependent dehydratase from paralcaligenes ureilyticus in complex with mg
66% identity, 98% coverage: 12:579/579 of query aligns to 3:568/568 of 8ej0A
8epzA Crystal structure of fe-s cluster-dependent dehydratase from paralcaligenes ureilyticus in complex with mn
66% identity, 98% coverage: 12:579/579 of query aligns to 4:569/569 of 8epzA
Q1JUQ1 L-arabonate dehydratase; L-arabinonate dehydratase; EC 4.2.1.25 from Azospirillum brasilense (see paper)
66% identity, 98% coverage: 10:579/579 of query aligns to 7:583/583 of Q1JUQ1
7m3kA Crystal structure of galactonate dehydratase from brucella melitensis biovar abortus 2308
50% identity, 91% coverage: 10:534/579 of query aligns to 1:538/587 of 7m3kA
5oynA Crystal structure of d-xylonate dehydratase in holo-form (see paper)
43% identity, 97% coverage: 8:567/579 of query aligns to 4:575/589 of 5oynA
Q9A9Z2 D-xylonate dehydratase; XyDHT; Gluconate dehydratase; EC 4.2.1.82; EC 4.2.1.39 from Caulobacter vibrioides (strain ATCC 19089 / CB15) (Caulobacter crescentus) (see 2 papers)
43% identity, 97% coverage: 8:567/579 of query aligns to 10:581/595 of Q9A9Z2
6ovtA Crystal structure of ilvd from mycobacterium tuberculosis (see paper)
39% identity, 95% coverage: 10:561/579 of query aligns to 5:559/562 of 6ovtA
P9WKJ5 Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
39% identity, 95% coverage: 10:561/579 of query aligns to 18:572/575 of P9WKJ5
Q9LIR4 Dihydroxy-acid dehydratase, chloroplastic; AthDHAD; DAD; EC 4.2.1.9 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
36% identity, 94% coverage: 21:564/579 of query aligns to 68:607/608 of Q9LIR4
8hs0A The mutant structure of dhad v178w
36% identity, 94% coverage: 21:564/579 of query aligns to 30:569/570 of 8hs0A
>SM_b20890 FitnessBrowser__Smeli:SM_b20890
MKKKAEWPRKLRSQEWFGGTGKNAIMHRSWMKNQGLPADTFDGRPIIGICNTWSELTPCN
AHLRDLAERVKRGVYEAGGFPVEFPVFSTGESTLRPTAMMFRNLAAMDVEESIRGNPVDG
VVLLGGCDKTTPSLLMGAASVDIPAIVVSGGPMLNGKWRGKDVGSGTAIWQFSEMVKSGE
MSLEEFMDAEQGMARSAGSCMTMGTASTMASMAEALGMTLSGNAAIPAVDARRRVISQLT
GRRIVEMVKEDLKPSDILTKEAFENAIRVNGAVGGSTNAVLHLLALAGRVGVDLSLDDWD
RLGRDVPTIVNLQPSGKYLMEEFYYAGGLPVVIKAVAEMGLLHNDAITVSGDTIWNDVKG
VVNYNEDVILPREKALTKSGGIAVLRGNLAPRGAVLKPSAASPHLMQHKGRAVVFESIED
YHARINREDLDIDETCIMVLKYCGPKGYPGMAEVGNMGLPPKVLKKGITDMIRISDARMS
GTAYGTVILHTAPEAAEGGPLALVENGDLIEVDIPNRTLHLHVSDEELARRRAAWVSPVK
PLTGGYGGLYIKTVMQADAGADLDFLVGARGSVVERDSH
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory