Comparing SM_b20895 FitnessBrowser__Smeli:SM_b20895 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 20 (the maximum) hits to proteins with known functional sites (download)
3uugA Crystal structure of the periplasmic sugar binding protein chve (see paper)
78% identity, 92% coverage: 26:353/355 of query aligns to 1:328/329 of 3uugA
3urmA Crystal structure of the periplasmic sugar binding protein chve (see paper)
78% identity, 92% coverage: 26:353/355 of query aligns to 1:328/329 of 3urmA
4wwhA Crystal structure of an abc transporter solute binding protein (ipr025997) from mycobacterium smegmatis (msmeg_1704, target efi- 510967) with bound d-galactose
65% identity, 92% coverage: 27:353/355 of query aligns to 2:328/329 of 4wwhA
4ys6A Crystal structure of an abc transporter solute binding protein (ipr025997) from clostridium phytofermentans (cphy_1585, target efi- 511156) with bound beta-d-glucose
50% identity, 92% coverage: 29:353/355 of query aligns to 2:323/324 of 4ys6A
3ma0A Closed liganded crystal structure of xylose binding protein from escherichia coli (see paper)
38% identity, 91% coverage: 30:353/355 of query aligns to 5:307/313 of 3ma0A
4rxuA Crystal structure of carbohydrate transporter solute binding protein caur_1924 from chloroflexus aurantiacus, target efi-511158, in complex with d-glucose
36% identity, 92% coverage: 30:355/355 of query aligns to 6:338/340 of 4rxuA
4ywhA Crystal structure of an abc transporter solute binding protein (ipr025997) from actinobacillus succinogenes 130z (asuc_0499, target efi-511068) with bound d-xylose
37% identity, 91% coverage: 30:351/355 of query aligns to 6:306/310 of 4ywhA
6s3tA P46, an immunodominant surface protein from mycoplasma hyopneumoniae (see paper)
28% identity, 87% coverage: 30:337/355 of query aligns to 15:370/374 of 6s3tA
6ruxA P46, an immunodominant surface protein from mycoplasma hyopneumoniae (see paper)
28% identity, 87% coverage: 30:337/355 of query aligns to 13:368/373 of 6ruxA
8fxuA Thermoanaerobacter thermosaccharolyticum periplasmic glucose-binding protein glucose complex: badan conjugate attached at f17c (see paper)
29% identity, 67% coverage: 70:308/355 of query aligns to 45:279/310 of 8fxuA
Sites not aligning to the query:
4yo7A Crystal structure of an abc transporter solute binding protein (ipr025997) from bacillus halodurans c-125 (bh2323, target efi- 511484) with bound myo-inositol
23% identity, 81% coverage: 54:339/355 of query aligns to 29:286/287 of 4yo7A
Sites not aligning to the query:
P0AEE5 D-galactose/methyl-galactoside binding periplasmic protein MglB; D-galactose-binding periplasmic protein; GBP; D-galactose/D-glucose-binding protein; GGBP from Escherichia coli (strain K12) (see 4 papers)
27% identity, 80% coverage: 54:337/355 of query aligns to 49:325/332 of P0AEE5
Sites not aligning to the query:
2qw1A Glucose/galactose binding protein bound to 3-o-methyl d-glucose (see paper)
27% identity, 80% coverage: 54:337/355 of query aligns to 25:301/305 of 2qw1A
P23905 D-galactose/methyl-galactoside binding periplasmic protein MglB; D-galactose-binding periplasmic protein; GBP; D-galactose/D-glucose-binding protein; GGBP from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see 2 papers)
27% identity, 80% coverage: 54:337/355 of query aligns to 49:325/332 of P23905
Sites not aligning to the query:
3ga5A X-ray structure of glucose/galactose receptor from salmonella typhimurium in complex with (2r)-glyceryl-beta-d-galactopyranoside (see paper)
27% identity, 80% coverage: 54:337/355 of query aligns to 24:300/305 of 3ga5A