Comparing SM_b20960 FitnessBrowser__Smeli:SM_b20960 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
2ux8G Crystal structure of sphingomonas elodea atcc 31461 glucose-1- phosphate uridylyltransferase in complex with glucose-1-phosphate. (see paper)
53% identity, 92% coverage: 4:279/301 of query aligns to 2:275/288 of 2ux8G
2ux8A Crystal structure of sphingomonas elodea atcc 31461 glucose-1- phosphate uridylyltransferase in complex with glucose-1-phosphate. (see paper)
47% identity, 92% coverage: 4:279/301 of query aligns to 2:242/255 of 2ux8A
5i1fA Crystal structure of utp-glucose-1-phosphate uridylyltransferase from burkholderia vietnamiensis in complex with uridine-5'-diphosphate- glucose
45% identity, 91% coverage: 7:280/301 of query aligns to 5:278/290 of 5i1fA
5ve7A Crystal structure of utp-glucose-1-phosphate uridylyltransferase from burkholderia ambifaria in complex with utp
45% identity, 91% coverage: 7:280/301 of query aligns to 3:272/282 of 5ve7A
6knlA Uridine and triphosphate-bound ugpase from acinetobacter baumannii
42% identity, 91% coverage: 7:280/301 of query aligns to 2:279/290 of 6knlA
6k8dA Udp-glucose pyrophosphorylase with upg from acinetobacter baumanii
42% identity, 91% coverage: 7:280/301 of query aligns to 2:279/290 of 6k8dA
8f73E Crystal structure of pseudomonas aeruginosa udp-glucose phosphorylase in complex with udp-glucose
42% identity, 88% coverage: 6:269/301 of query aligns to 7:271/281 of 8f73E
3jukA The crystal structure of udp-glucose pyrophosphorylase complexed with udp-glucose (see paper)
41% identity, 90% coverage: 7:276/301 of query aligns to 2:264/265 of 3jukA
3jukD The crystal structure of udp-glucose pyrophosphorylase complexed with udp-glucose (see paper)
41% identity, 90% coverage: 7:276/301 of query aligns to 2:264/264 of 3jukD
6ikzB Udp-glucose pyrophosphorylase from acinetobacter baumanii
40% identity, 91% coverage: 7:280/301 of query aligns to 2:274/285 of 6ikzB
8b6dA Crystal structure of udp-glucose pyrophosphorylase from thermocrispum agreste dsm 44070 in complex with udp
41% identity, 91% coverage: 6:280/301 of query aligns to 1:277/291 of 8b6dA
8b68A Crystal structure of udp-glucose pyrophosphorylase from thermocrispum agreste dsm 44070 in complex with udp-glucose
40% identity, 91% coverage: 6:280/301 of query aligns to 1:272/286 of 8b68A
2pa4B Crystal structure of udp-glucose pyrophosphorylase from corynebacteria glutamicum in complex with magnesium and udp-glucose (see paper)
35% identity, 97% coverage: 7:299/301 of query aligns to 3:298/299 of 2pa4B
5ifyA Crystal structure of glucose-1-phosphate thymidylyltransferase from burkholderia vietnamiensis in complex with 2 -deoxyuridine-5'- monophosphate and 2'-deoxy-thymidine-b-l-rhamnose
28% identity, 76% coverage: 8:236/301 of query aligns to 2:200/293 of 5ifyA
Sites not aligning to the query:
1h5tA Thymidylyltransferase complexed with thymidylyldiphosphate-glucose (see paper)
27% identity, 87% coverage: 7:269/301 of query aligns to 2:236/290 of 1h5tA
Sites not aligning to the query:
1h5rA Thymidylyltransferase complexed with thimidine and glucose-1-phospate (see paper)
27% identity, 87% coverage: 7:269/301 of query aligns to 2:236/290 of 1h5rA
Sites not aligning to the query:
1h5sB Thymidylyltransferase complexed with tmp (see paper)
27% identity, 87% coverage: 7:269/301 of query aligns to 3:237/291 of 1h5sB
Sites not aligning to the query:
5z09A St0452(y97n)-utp binding form (see paper)
24% identity, 87% coverage: 9:269/301 of query aligns to 2:219/401 of 5z09A
6n0uA Crystal structure of a glucose-1-phosphate thymidylyltransferase from burkholderia phymatum bound to 2'-deoxy-thymidine-b-l-rhamnose
26% identity, 92% coverage: 8:283/301 of query aligns to 4:251/295 of 6n0uA
P26393 Glucose-1-phosphate thymidylyltransferase; dTDP-glucose pyrophosphorylase; Ep; dTDP-glucose synthase; EC 2.7.7.24 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
27% identity, 87% coverage: 7:269/301 of query aligns to 3:237/292 of P26393
>SM_b20960 FitnessBrowser__Smeli:SM_b20960
MDRVRTVRKAVIPVAGNGTRFLPATKAVPKEMLTIVDRPVVQYAVDEARQAGIEHIVFVT
SRNKQVIEDHFDDAPELISSLSRSGKSAQISELEAMLPAAGSVSFTRQQAPLGLGHAVWC
ARDLIGDEPFALLLPDMVSFGARGCVAGLMDLYHEVGGNVVGVEQCAPEEASKYGIVGKG
ETVRHGFSVTEMVEKPAAGKAPSNYYLNGRYILQPEIFSILAHQTRGAGNEIQLTDGMLT
LSQSQSFHAHPYEGRTFDCGSKQGFIEANVAFALARADIGDIVFESVRDMVLSHESRIRA
A
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Lawrence Berkeley National Laboratory