Comparing SM_b21108 FitnessBrowser__Smeli:SM_b21108 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 5 hits to proteins with known functional sites (download)
7bywA Crystal structure of acidovorax avenae l-fucose mutarotase (l-fucose- bound form) (see paper)
65% identity, 99% coverage: 2:109/109 of query aligns to 1:108/108 of 7bywA
2qlxA Crystal structure of rhamnose mutarotase rhau of rhizobium leguminosarum in complex with l-rhamnose (see paper)
27% identity, 84% coverage: 1:92/109 of query aligns to 5:99/108 of 2qlxA
2qlwB Crystal structure of rhamnose mutarotase rhau of rhizobium leguminosarum (see paper)
27% identity, 84% coverage: 1:92/109 of query aligns to 5:99/108 of 2qlwB
1x8dA Crystal structure of e. Coli yiil protein containing l-rhamnose (see paper)
33% identity, 73% coverage: 1:80/109 of query aligns to 1:77/104 of 1x8dA
P32156 L-rhamnose mutarotase; Rhamnose 1-epimerase; Type-3 mutarotase; EC 5.1.3.32 from Escherichia coli (strain K12) (see paper)
33% identity, 73% coverage: 1:80/109 of query aligns to 1:77/104 of P32156
>SM_b21108 FitnessBrowser__Smeli:SM_b21108
MQRMGMVIGLEPSKIAEYKRLHAAVWPEILALISECNITNYSIFLKEPENLLFGYWEYVG
EDFEADMTKMAAHPKNQEWWSVCMPCQKPLESRRQGEWWAMMEEVFHHD
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory