Comparing SM_b21166 FitnessBrowser__Smeli:SM_b21166 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 12 hits to proteins with known functional sites (download)
Q8U8Z6 Imidazolonepropionase; Imidazolone-5-propanoate hydrolase; Imidazolone-5-propionate hydrolase; EC 3.5.2.7 from Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium tumefaciens (strain C58)) (see 2 papers)
74% identity, 85% coverage: 68:469/471 of query aligns to 16:417/419 of Q8U8Z6
2puzB Crystal structure of imidazolonepropionase from agrobacterium tumefaciens with bound product n-formimino-l-glutamate (see paper)
74% identity, 85% coverage: 68:469/471 of query aligns to 2:403/404 of 2puzB
2gokA Crystal structure of the imidazolonepropionase from agrobacterium tumefaciens at 1.87 a resolution (see paper)
74% identity, 85% coverage: 68:469/471 of query aligns to 2:403/404 of 2gokA
A0KF84 Imidazolonepropionase; Imidazolone-5-propionate hydrolase; EC 3.5.2.7 from Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / BCRC 13018 / CCUG 14551 / JCM 1027 / KCTC 2358 / NCIMB 9240 / NCTC 8049) (see paper)
51% identity, 85% coverage: 70:471/471 of query aligns to 11:410/411 of A0KF84
2q09A Crystal structure of imidazolonepropionase from environmental sample with bound inhibitor 3-(2,5-dioxo-imidazolidin-4-yl)-propionic acid (see paper)
51% identity, 85% coverage: 70:471/471 of query aligns to 5:402/402 of 2q09A
2oofA The crystal structure of 4-imidazolone-5-propanoate amidohydrolase from environmental sample
51% identity, 85% coverage: 70:471/471 of query aligns to 6:403/403 of 2oofA
2g3fA Crystal structure of imidazolonepropionase complexed with imidazole-4- acetic acid sodium salt, a substrate homologue (see paper)
38% identity, 87% coverage: 63:471/471 of query aligns to 1:413/414 of 2g3fA
P42084 Imidazolonepropionase; Imidazolone-5-propionate hydrolase; EC 3.5.2.7 from Bacillus subtilis (strain 168) (see paper)
38% identity, 87% coverage: 63:471/471 of query aligns to 2:414/421 of P42084
2bb0A Structure of imidazolonepropionase from bacillus subtilis (see paper)
38% identity, 83% coverage: 81:471/471 of query aligns to 25:412/413 of 2bb0A
Q9EYU0 Melamine deaminase; EC 3.5.4.45 from Paracidovorax citrulli (Acidovorax citrulli) (see paper)
23% identity, 76% coverage: 88:447/471 of query aligns to 20:400/474 of Q9EYU0
4gbdA Crystal structure of adenosine deaminase from pseudomonas aeruginosa pao1 with bound zn and methylthio-coformycin (see paper)
27% identity, 31% coverage: 325:470/471 of query aligns to 249:409/435 of 4gbdA
Sites not aligning to the query:
4dykA Crystal structure of an adenosine deaminase from pseudomonas aeruginosa pao1 (target nysgrc-200449) with bound zn
27% identity, 31% coverage: 325:470/471 of query aligns to 249:409/437 of 4dykA
Sites not aligning to the query:
>SM_b21166 FitnessBrowser__Smeli:SM_b21166
MPGGVAGARSQRPPPMPILFPCFWPAAPIALSHGSYFSLVIAGIMYIHYWRRRAAPMDGN
ENPNPARTSLWRNARLATLREELGPLGIIEDGVIAVRGERIVYAGPEAGLPSELARADQV
FDCEGRWVTPALIDCHTHIVHGGNRAREFQLRLEGATYEEIARAGGGIASTVEATNALSV
EALVEAALPRLDTLLAEGVSTVEVKSGYGLNVEAELKMLRAARRLESLRPVRIVTSYLAA
HATPPEFRGRNGDYIAEVVLPGLTAAHAEGLADAVDGFCEGIAFSPAEIASVFGRAKSLG
LPVKLHAEQLSDLGGAKLAASYGALSADHLEYLDAAGAAAMAKAGTVAVLLPGAFYTLRE
KQLPPVEALREAGTRIAIATDCNPGTSPLTSLLLTLNMSATLFRLTLEECLAGVTREAAR
ALGILGETGTIEAGKSADLAIWNIDQPAELIYRIGFNPLRERIFKGERILR
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory