Comparing SM_b21654 FitnessBrowser__Smeli:SM_b21654 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 2 hits to proteins with known functional sites (download)
P94530 Arabinooligosaccharides transport system permease protein AraQ from Bacillus subtilis (strain 168) (see paper)
33% identity, 94% coverage: 16:272/272 of query aligns to 18:280/281 of P94530
P68183 Maltose/maltodextrin transport system permease protein MalG from Escherichia coli (strain K12) (see 2 papers)
25% identity, 75% coverage: 68:272/272 of query aligns to 83:295/296 of P68183
>SM_b21654 FitnessBrowser__Smeli:SM_b21654
MNGFGRFAAMAATYGFLGLMAFLSVFPFIWMVLGATNSSIDIIKGKLLPGAAFATNVANF
FTLVNVPLVFWNSAKIAIVATVLTLAVSSLAGYGFEMFRSRRRERVYRAMLLTLMIPFAA
LMIPLFVMMGKAGLINTHLAVVLPSIGSAFVIFYFRQSTKAFPSELRDAAKVDGLKEWQI
FLFIYVPVMRSTYAAAFVIVFMTAWNNYLWPLIVLQTNETKTITLVISSLASAYYPDYGV
VMVGTILATLPTLAVFFFMQRQFVQGMLGSVK
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory