Comparing SMa0680 FitnessBrowser__Smeli:SMa0680 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 8 hits to proteins with known functional sites (download)
1ordA Crystallographic structure of a plp-dependent ornithine decarboxylase from lactobacillus 30a to 3.1 angstroms resolution (see paper)
51% identity, 82% coverage: 124:765/782 of query aligns to 92:702/730 of 1ordA
1c4kA Ornithine decarboxylase mutant (gly121tyr) (see paper)
51% identity, 82% coverage: 124:765/782 of query aligns to 90:700/728 of 1c4kA
6q6iA Lysine decarboxylase a from pseudomonas aeruginosa
37% identity, 89% coverage: 69:764/782 of query aligns to 75:732/749 of 6q6iA
2vycA Crystal structure of acid induced arginine decarboxylase from e. Coli (see paper)
33% identity, 90% coverage: 70:771/782 of query aligns to 70:746/755 of 2vycA
P28629 Biodegradative arginine decarboxylase; ADC; EC 4.1.1.19 from Escherichia coli (strain K12) (see paper)
33% identity, 90% coverage: 70:771/782 of query aligns to 70:746/755 of P28629
5xx1G Crystal structure of arginine decarboxylase (adia) from salmonella typhimurium (see paper)
34% identity, 85% coverage: 109:771/782 of query aligns to 110:726/735 of 5xx1G
6q7lA Inducible lysine decarboxylase (see paper)
32% identity, 88% coverage: 87:772/782 of query aligns to 78:703/711 of 6q7lA
3n75A X-ray crystal structure of the escherichia coli inducible lysine decarboxylase ldci (see paper)
32% identity, 88% coverage: 87:772/782 of query aligns to 78:703/711 of 3n75A
>SMa0680 FitnessBrowser__Smeli:SMa0680
MKAPTVPIPFHKLLKVVAFVDESNLETKRLLAHIVAENFEVELRGSYNADVSEDASVGAY
IGTVEGGRLEDARKFVRAVRDIGFRTPLWALADSHGIADIAAIKMAGEVDGFVYLGQQTP
AFYAKQIISSLVNYGKTLLPPFFGGLMAYDGEANIAFDCPGHQGGQFYRKSPAGQLFFNY
FGESIFRADLCNADVDLGDLLIHEGPAAEAQKNAARIFGADRTYFILNGTSTSNKVVTNA
VLRAGDLVLFDRNNHKSLHQGALVQAGAIPVYLPTSRNSFGMIGAVDWDAWDEASLRRQI
ERHPLVEDKARASAERPFRLACIQLATYDGTIYNVRKVLEQIGHLCDYVLWDEAWIGYNA
FHPLFEDHSPMRIDTLDAEMPGLFSTQSVHKQGAGFSQASQIHKRDEHIRDQRRYVEHKR
FNESLLMHVSTSPFYPLFASLDVNAKIHEGKAGEMLWDRCIELGIEARKKLREFTRYYES
SGAGPQEQWFFDPFVPDVVTISGSKHTEDVVESRWEALPTEVIKREQQCWRFRPGASWHG
YSGYSDGYAMVDPNKLTLLTPGIDRATGEYRDFGIPATMVANYLREQRIVPEKCDLNSIL
FLLTPAEDESKLNTLIAKLVKFKNLWDRDAPLAEVLPTVFAANRERYAGYTLRQVCAEMH
DFYRQAGVKELQRLCFRAESMPEPAMTPKAAYEALVANEVDYVALDEAFGRISATLALIY
PPGIGVIVPGERWDERARPMHNYFLAFQESFNRFPGFNYEVQGVFQERVDGQIKFYTYAV
RE
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory