Comparing SMa1341 FitnessBrowser__Smeli:SMa1341 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 2 hits to proteins with known functional sites (download)
P68183 Maltose/maltodextrin transport system permease protein MalG from Escherichia coli (strain K12) (see 2 papers)
29% identity, 64% coverage: 116:318/319 of query aligns to 87:295/296 of P68183
P94530 Arabinooligosaccharides transport system permease protein AraQ from Bacillus subtilis (strain 168) (see paper)
20% identity, 97% coverage: 9:318/319 of query aligns to 7:280/281 of P94530
>SMa1341 FitnessBrowser__Smeli:SMa1341
MAAVQTRSERALNRVAIAAVLVITLLFLAPIYWITSTAFKPRNLATTIPPTVIFEPEISP
FVKLFTKRSQLRSAPEPEDYAAAPWWERLVFDGGEKVVRSGRGQVQLSGYPNRFMNSLIV
AITSTVLAVAMGTFTAYGFSRFKVKGEADLLFFILSTRMLPPVVVAIPMFLMYRAVGLND
THWGLIILYTAFNLSFSVWLMKGFIDEIPKEYEEAALVDGYTRLEAFFKIVLPEAATGIA
ATAVFCFITAWNEYAFALIMTNRRAQTAPPFIPSQVGSGLPDWTVIAAGTFLFLLPVAIF
TFLLRNHLLRGMSFGAIRK
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory