Comparing SMc00035 FitnessBrowser__Smeli:SMc00035 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 2 hits to proteins with known functional sites (download)
8oriD Crystal structure of rhizobium etli l-asparaginase reaiv (orthorhombic) (see paper)
74% identity, 100% coverage: 1:336/336 of query aligns to 7:341/341 of 8oriD
7os3AAA L-asparaginase II protein (see paper)
32% identity, 96% coverage: 6:327/336 of query aligns to 11:348/369 of 7os3AAA
>SMc00035 FitnessBrowser__Smeli:SMc00035
MSNPVLVEVTRGNLVESRHRGMIVAVDGDGKTLFSLGETDAHIFPRSACKAMQALPLIES
GAADANGFGDRELALACSSHSGEPEHVALAAKMLSAAGRDVQALECGAHWSSDQKTLIAQ
ARSLEAPSALHNNCSGKHAGFVCACCHSGTEVKGYIGYDHPIQQEIRGVMAELTGAVLDR
DNCGVDGCSIPTYALSMRGLAHGFARMASGVGLGAERARASKRLIEACMAEPFFVAGTKR
ACTRLMKTAPGRIFAKTGAEGVFCAAIPEKGIGIALKCEDGTTRAAEAMVAATLARFFSD
DAEIHEALMAQANHAMRNWNGIHVGDVRVVTEAFAA
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory