SitesBLAST

Comparing SMc00500 FitnessBrowser__Smeli:SMc00500 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found no hits to proteins with known functional sites (download)

Query Sequence

>SMc00500 FitnessBrowser__Smeli:SMc00500
MDGILQSLGVIFSLSGVAVLVTGALLGIVIGALPGLGPSIGLSLLIPFTYNLGPELSMLL
MISLYTSAEYGGSISAILLSTPGTAAAAATAIDGYSMARQGKANEAISISLTASTVGGVL
GGLALLLLAMPLASLALKFGPAGYFAVGVFGLSSVAALSGGSLVKGLACAAFGLALATVG
IDPIAGTPRFTFGLFQLYEGVPFLAALIGLFAVSEALAMVESRVVSAPSIKDKVGHVFMS
AALWKETWHSMLSGSVIGTLLGILPGVGGNIACWVARDYARARDRHPEEFGNGSANGIAA
PEAANNATVGGALVPLLALGVPGSPTTAIMVGALIMHGLHPGPQLFNEAPSLVYAILFGT
IIASLVQYAAGSLFLPLMARVMRLPDAVIAVGIMAFAVLGAFAIRNLMFDVYLMLGFGVV
GYLMKKLRFPVAPVILAMVLGYLVESNYRTALVSSQGDYTIFVTDPISLIFLILSLVSLL
TPLWRRIQAHRASARTEETADGTVR

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SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.