Comparing SMc00917 FitnessBrowser__Smeli:SMc00917 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
6czmE Crystal structure of medicago truncatula atp-phosphoribosyltransferase in tense form (see paper)
29% identity, 99% coverage: 3:230/231 of query aligns to 10:241/342 of 6czmE
Sites not aligning to the query:
2vd3A The structure of histidine inhibited hisg from methanobacterium thermoautotrophicum
31% identity, 99% coverage: 3:231/231 of query aligns to 5:211/289 of 2vd3A
Sites not aligning to the query:
1q1kA Structure of atp-phosphoribosyltransferase from e. Coli complexed with pr-atp (see paper)
30% identity, 98% coverage: 5:231/231 of query aligns to 5:217/288 of 1q1kA
1h3dA Structure of the e.Coli atp-phosphoribosyltransferase (see paper)
30% identity, 98% coverage: 5:231/231 of query aligns to 5:217/288 of 1h3dA
6czmF Crystal structure of medicago truncatula atp-phosphoribosyltransferase in tense form (see paper)
28% identity, 99% coverage: 3:230/231 of query aligns to 3:214/315 of 6czmF
Sites not aligning to the query:
4yb6E Adenosine triphosphate phosphoribosyltransferase from campylobacter jejuni in complex with the inhibitors amp and histidine (see paper)
27% identity, 98% coverage: 5:231/231 of query aligns to 6:215/293 of 4yb6E
Sites not aligning to the query:
5lhtA Atp phosphoribosyltransferase from mycobacterium tuberculosis in complex with the allosteric activator 3-(2-thienyl)-l-alanine (see paper)
31% identity, 98% coverage: 5:231/231 of query aligns to 4:207/284 of 5lhtA
Sites not aligning to the query:
5ubgA Catalytic core domain of adenosine triphosphate phosphoribosyltransferase from campylobacter jejuni with bound phosphoribosyl-atp (see paper)
27% identity, 98% coverage: 5:231/231 of query aligns to 6:218/222 of 5ubgA
5ub9A Catalytic core domain of adenosine triphosphate phosphoribosyltransferase from campylobacter jejuni (see paper)
27% identity, 98% coverage: 5:231/231 of query aligns to 5:216/220 of 5ub9A
5ubiA Catalytic core domain of adenosine triphosphate phosphoribosyltransferase from campylobacter jejuni with bound prpp (see paper)
27% identity, 98% coverage: 5:231/231 of query aligns to 6:218/218 of 5ubiA
4yb7A Adenosine triphosphate phosphoribosyltransferase from campylobacter jejuni in complex with atp (see paper)
27% identity, 98% coverage: 5:231/231 of query aligns to 6:218/296 of 4yb7A
4yb6A Adenosine triphosphate phosphoribosyltransferase from campylobacter jejuni in complex with the inhibitors amp and histidine (see paper)
27% identity, 98% coverage: 5:231/231 of query aligns to 6:218/296 of 4yb6A
Sites not aligning to the query:
4yb7C Adenosine triphosphate phosphoribosyltransferase from campylobacter jejuni in complex with atp (see paper)
27% identity, 98% coverage: 5:231/231 of query aligns to 6:218/294 of 4yb7C
5u99A Transition state analysis of adenosine triphosphate phosphoribosyltransferase (see paper)
31% identity, 98% coverage: 5:231/231 of query aligns to 6:203/278 of 5u99A
1z7mE Atp phosphoribosyl transferase (hiszg atp-prtase) from lactococcus lactis (see paper)
26% identity, 81% coverage: 9:195/231 of query aligns to 7:168/200 of 1z7mE
1nh8A Atp phosphoribosyltransferase (atp-prtase) from mycobacterium tuberculosis in complex with amp and histidine (see paper)
31% identity, 98% coverage: 5:231/231 of query aligns to 4:199/276 of 1nh8A
Sites not aligning to the query:
1z7nF Atp phosphoribosyl transferase (hiszg atp-prtase) from lactococcus lactis with bound prpp substrate (see paper)
26% identity, 81% coverage: 9:195/231 of query aligns to 7:172/205 of 1z7nF
7dahC Adenosine triphosphate phosphoribosyltransferase from vibrio cholerae in complex with atp and prpp
28% identity, 88% coverage: 5:208/231 of query aligns to 6:194/288 of 7dahC
6fcyA Catalytic subunit hisg from psychrobacter arcticus atp phosphoribosyltransferase (hiszg atpprt) in complex with prpp and adp
29% identity, 83% coverage: 1:192/231 of query aligns to 2:170/208 of 6fcyA
6fd9A Catalytic subunit hisg from psychrobacter arcticus atp phosphoribosyltransferase (hiszg atpprt) in complex with amp
29% identity, 83% coverage: 1:192/231 of query aligns to 2:170/209 of 6fd9A
>SMc00917 FitnessBrowser__Smeli:SMc00917
MTVTIALPSKGRMKDEASAIFERAGMKIAAVGSDRSYRGRVEGWDDVEIAYLSASEIARE
IGSGAVDFGVTGEDLVREGLADADARVDFAARLGFGHADVVVAVPEIWYDVDTMADLGDV
AADFRARHGRRLAIATKYWRLTQQFFSGSHGIQLYRIVESLGATEGAPASGSADIIVDIT
STGSTLKANHLKILSDGVILRSEACLVRARKATHEGNPVIDRIVAAVRAVL
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory