Comparing SMc01430 FitnessBrowser__Smeli:SMc01430 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 10 hits to proteins with known functional sites (download)
2pc6A Crystal structure of putative acetolactate synthase- small subunit from nitrosomonas europaea (see paper)
44% identity, 87% coverage: 24:188/190 of query aligns to 4:160/164 of 2pc6A
A0QUX7 Acetolactate synthase small subunit; Acetohydroxy-acid synthase small subunit; AHAS; ALS; EC 2.2.1.6 from Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium smegmatis) (see paper)
40% identity, 88% coverage: 23:190/190 of query aligns to 7:166/170 of A0QUX7
P9WKJ3 Putative acetolactate synthase small subunit; Acetohydroxy-acid synthase small subunit; AHAS; ALS; EC 2.2.1.6 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
41% identity, 89% coverage: 22:190/190 of query aligns to 4:164/168 of P9WKJ3
Q9FFF4 Acetolactate synthase small subunit 2, chloroplastic; ALS-interacting protein 3; Acetohydroxy-acid synthase small subunit 2; Protein valine-tolerant 1 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
39% identity, 87% coverage: 24:189/190 of query aligns to 77:232/477 of Q9FFF4
Sites not aligning to the query:
O60086 Probable acetolactate synthase small subunit; Acetohydroxy-acid synthase small subunit; AHAS; ALS from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
34% identity, 86% coverage: 24:187/190 of query aligns to 71:266/289 of O60086
Sites not aligning to the query:
Q93YZ7 Acetolactate synthase small subunit 1, chloroplastic; ALS-interacting protein 1; Acetohydroxyacid synthase small subunit 1 from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
40% identity, 87% coverage: 24:189/190 of query aligns to 87:242/491 of Q93YZ7
Sites not aligning to the query:
6vz8F Arabidopsis thaliana acetohydroxyacid synthase complex with valine bound (see paper)
41% identity, 85% coverage: 24:185/190 of query aligns to 5:156/159 of 6vz8F
6wo1B Hybrid acetohydroxyacid synthase complex structure with cryptococcus neoformans ahas catalytic subunit and saccharomyces cerevisiae ahas regulatory subunit (see paper)
32% identity, 87% coverage: 22:187/190 of query aligns to 3:197/197 of 6wo1B
6vz8G Arabidopsis thaliana acetohydroxyacid synthase complex with valine bound (see paper)
39% identity, 86% coverage: 23:185/190 of query aligns to 3:157/159 of 6vz8G
6u9dL Saccharomyces cerevisiae acetohydroxyacid synthase (see paper)
31% identity, 86% coverage: 24:187/190 of query aligns to 38:242/255 of 6u9dL
>SMc01430 FitnessBrowser__Smeli:SMc01430
MNAHLQPTGSAYFIAKETELAETHTLSVLVDNEPGVLARVIGLFSGRGYNIESLTVSETE
HEAHLSRITIVTRGTPHVLEQIKNQLERLVPVHRVVDLTVRAAGLGHERPIERELALVKV
HGSGEHRVEALRLADAFRASVIDANIDHFVFEITGKPSKIEQFIAIMKPLGLIEVCRTGI
AAMNRGPQGM
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory