Comparing SMc01587 FitnessBrowser__Smeli:SMc01587 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
2xf4A Crystal structure of salmonella enterica serovar typhimurium ycbl (see paper)
50% identity, 97% coverage: 6:211/213 of query aligns to 5:209/210 of 2xf4A
2zwrB Crystal structure of ttha1623 from thermus thermophilus hb8 (see paper)
42% identity, 98% coverage: 6:213/213 of query aligns to 3:203/207 of 2zwrB
7ev5A Crystal structure of bleg-1 b3 metallo-beta-lactamase (see paper)
36% identity, 97% coverage: 7:212/213 of query aligns to 5:209/209 of 7ev5A
2zziA Crystal structure of ttha1623 in a di-iron-bound form (see paper)
41% identity, 96% coverage: 6:210/213 of query aligns to 1:198/198 of 2zziA
7l0bA Crystal structure of hydroxyacyl glutathione hydrolase (glob) from staphylococcus aureus, apoenzyme (see paper)
35% identity, 93% coverage: 15:212/213 of query aligns to 13:202/202 of 7l0bA
Q9SID3 Hydroxyacylglutathione hydrolase 2, mitochondrial; Glyoxalase II; Glx II; EC 3.1.2.6 from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
30% identity, 91% coverage: 2:194/213 of query aligns to 71:239/324 of Q9SID3
2q42A Ensemble refinement of the protein crystal structure of glyoxalase ii from arabidopsis thaliana gene at2g31350 (see paper)
29% identity, 91% coverage: 2:194/213 of query aligns to 1:169/254 of 2q42A
4ysbA Crystal structure of ethe1 from myxococcus xanthus (see paper)
30% identity, 90% coverage: 21:212/213 of query aligns to 20:192/225 of 4ysbA
3tp9A Crystal structure of alicyclobacillus acidocaldarius protein with beta-lactamase and rhodanese domains
30% identity, 85% coverage: 23:202/213 of query aligns to 24:206/473 of 3tp9A
4chlB Human ethylmalonic encephalopathy protein 1 (hethe1) (see paper)
29% identity, 92% coverage: 15:210/213 of query aligns to 17:199/237 of 4chlB
5ve5A Crystal structure of persulfide dioxygenase rhodanese fusion protein with rhodanese domain inactivating mutation (c314s) from burkholderia phytofirmans in complex with glutathione (see paper)
27% identity, 92% coverage: 18:212/213 of query aligns to 20:198/350 of 5ve5A
Sites not aligning to the query:
O95571 Persulfide dioxygenase ETHE1, mitochondrial; Ethylmalonic encephalopathy protein 1; Hepatoma subtracted clone one protein; Sulfur dioxygenase ETHE1; EC 1.13.11.18 from Homo sapiens (Human) (see 4 papers)
29% identity, 92% coverage: 15:210/213 of query aligns to 33:215/254 of O95571
Sites not aligning to the query:
6sg9FL uS3m (see paper)
25% identity, 99% coverage: 1:211/213 of query aligns to 51:298/320 of 6sg9FL
Sites not aligning to the query:
6rz0A Crystal structure of escherichia coli glyoxalase ii
31% identity, 87% coverage: 9:194/213 of query aligns to 6:165/251 of 6rz0A
2gcuA X-ray structure of gene product from arabidopsis thaliana at1g53580 (see paper)
30% identity, 87% coverage: 25:210/213 of query aligns to 28:203/244 of 2gcuA
Q9C8L4 Persulfide dioxygenase ETHE1 homolog, mitochondrial; Glyoxalase II; Glx II; Sulfur dioxygenase ETHE1; EC 1.13.11.18 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
30% identity, 87% coverage: 25:210/213 of query aligns to 77:252/294 of Q9C8L4
4efzA Crystal structure of a hypothetical metallo-beta-lactamase from burkholderia pseudomallei
28% identity, 92% coverage: 15:211/213 of query aligns to 15:239/295 of 4efzA
8ewoA Crystal structure of putative glyoxylase ii from pseudomonas aeruginosa
30% identity, 91% coverage: 1:194/213 of query aligns to 2:171/259 of 8ewoA
3r2uB 2.1 angstrom resolution crystal structure of metallo-beta-lactamase from staphylococcus aureus subsp. Aureus col
25% identity, 92% coverage: 11:207/213 of query aligns to 14:210/336 of 3r2uB
Sites not aligning to the query:
Q8ZRM2 Hydroxyacylglutathione hydrolase; Glyoxalase II; Glx II; EC 3.1.2.6 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
30% identity, 87% coverage: 9:194/213 of query aligns to 6:165/251 of Q8ZRM2
>SMc01587 FitnessBrowser__Smeli:SMc01587
MLQAGIIPVTHFEQNCTVLFDSETKEGVVVDPGGDVDIILQTIRENGIALKAIWLTHGHI
DHAGGAKELKEALGLDIVGPHKDDLPLLERLEDQAERFGLAMKVQNVVPDRWLEEGDTVS
FGDHVFEVLHCPGHAPGHVVYFNRAQNFAHVGDVLFHGSIGRTDLPGGNHQQLLDSIRDK
ILPLGDNVGFICGHGPGGQIGEERRTNPFLRGL
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory