Comparing SMc01732 FitnessBrowser__Smeli:SMc01732 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 5 hits to proteins with known functional sites (download)
3tdtA Complex of tetrahydrodipicolinate n-succinyltransferase with 2-amino- 6-oxopimelate and coenzyme a (see paper)
61% identity, 94% coverage: 17:295/296 of query aligns to 1:271/274 of 3tdtA
2tdtA Complex of tetrahydrodipicolinate n-succinyltransferase with 2- aminopimelate and coenzyme a (see paper)
61% identity, 94% coverage: 17:295/296 of query aligns to 1:271/274 of 2tdtA
1kgtA Crystal structure of tetrahydrodipicolinate n-succinyltransferase in complex with pimelate and succinyl-coa (see paper)
61% identity, 94% coverage: 17:295/296 of query aligns to 1:271/274 of 1kgtA
1kgqA Crystal structure of tetrahydrodipicolinate n-succinyltransferase in complex with l-2-aminopimelate and succinamide-coa (see paper)
61% identity, 94% coverage: 17:295/296 of query aligns to 1:271/274 of 1kgqA
3r8yA Structure of the bacillus anthracis tetrahydropicolinate succinyltransferase
42% identity, 31% coverage: 122:212/296 of query aligns to 77:168/203 of 3r8yA
>SMc01732 FitnessBrowser__Smeli:SMc01732
MQHNAELEGFPMTNHDLASLSQTIETAFEGRDAVNTGTRGAVRDAVETALNLLDSGKVRV
AERSEDGTWTVNQWLKKAVLLSFRLNPMELVRGGPGEAVWWDKVASKFDGWSVNEFEKAG
FRAVPNCVVRRSAYIAPNAVLMPSFVNLGAYVGEGTMVDTWATVGSCAQIGKNVHLSGGV
GIGGVLEPMQAGPTIIEDNCFIGARSEVVEGCIVREGSVLGMGVFIGKSTKIVDRATGEV
MYGEVPPYSVVVAGSMASGSTMANGQPAPNLYCAVIVKRVDEKTRSKTGINELLRD
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory