SitesBLAST

Comparing SMc01950 SMc01950 high-affinity branched-chain amino acid ABC transporter permease to proteins with known functional sites using BLASTp with E ≤ 0.001.

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Found no hits to proteins with known functional sites (download)

Query Sequence

>SMc01950 SMc01950 high-affinity branched-chain amino acid ABC transporter permease
MANVASTTASAGSELTARALREAVFAGLITLGMFVLFVGLKTDQNIRNELILTQRWGLLA
TFVAIAMVGRFLMVAYVQPRLAQRKAAKAAAPDVVKEETFFSRNWSKIAVILLLIYPPVI
VALVGVQGSLKWVDNFGIQILIYVMLAWGLNIVVGLAGLLDLGYVAFYAVGAYSYALLSS
YFGLSFWVLLPIAGLLAACWGVVLGFPVLRLRGDYLAIVTLAFGEIIRLVLINWTEVTKG
TFGVSGIAKATLFGIKFDATKDGFAAMMGLPMSSAYYKIFLFYLILGLALLTAFVTIRLR
RMPIGRAWEALREDEIACRSLGINTVTTKLTAFATGAMFGGFAGSFFAVRQGFVSPESFV
FLESAVILAIVVLGGMGSLTGIAIAAVVMIGGTEILRELTFLKMIFGPTFTPELYRMLIF
GLAMVVVMVWKPRGFVGSREPTAFLRERRAISGSFTKEGHG

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SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.