Comparing SMc02087 SMc02087 type II citrate synthase to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
2h12B Structure of acetobacter aceti citrate synthase complexed with oxaloacetate and carboxymethyldethia coenzyme a (cmx) (see paper)
69% identity, 99% coverage: 5:429/429 of query aligns to 2:426/426 of 2h12B
P0ABH7 Citrate synthase; EC 2.3.3.16 from Escherichia coli (strain K12) (see 2 papers)
68% identity, 100% coverage: 1:429/429 of query aligns to 1:427/427 of P0ABH7
1owbA Three dimensional structure analysis of the variant r109l nadh complex of type ii citrate synthase from e. Coli (see paper)
68% identity, 100% coverage: 2:429/429 of query aligns to 1:426/426 of 1owbA
4jagA Structural determination of the a50t:s279g:s280k:v281k:k282e:h283n variant of citrate synthase from e. Coli complexed with oxaloacetate (see paper)
68% identity, 100% coverage: 2:429/429 of query aligns to 1:426/426 of 4jagA
4jaeA Structural determination of the a50t:s279g:s280k:v281k:k282e:h283n variant of citrate synthase from e. Coli complexed with s- carboxymethyl-coa (see paper)
68% identity, 100% coverage: 2:429/429 of query aligns to 1:426/426 of 4jaeA
1nxgA The f383a variant of type ii citrate synthase complexed with nadh (see paper)
68% identity, 100% coverage: 2:429/429 of query aligns to 1:426/426 of 1nxgA
P9WPD5 Citrate synthase 1; EC 2.3.3.16 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
54% identity, 100% coverage: 2:429/429 of query aligns to 4:431/431 of P9WPD5
3msuB Crystal structure of citrate synthase from francisella tularensis
55% identity, 98% coverage: 4:423/429 of query aligns to 10:426/426 of 3msuB
3msuA Crystal structure of citrate synthase from francisella tularensis
53% identity, 98% coverage: 4:423/429 of query aligns to 10:415/415 of 3msuA
4tvmA Structure of citrate synthase from mycobacterium tuberculosis (see paper)
49% identity, 98% coverage: 5:426/429 of query aligns to 1:380/380 of 4tvmA
6abwA Crystal structure of citrate synthase (msed_0281) from metallosphaera sedula in complex with acetyl-coa (see paper)
40% identity, 87% coverage: 55:429/429 of query aligns to 8:369/369 of 6abwA
6abyA Crystal structure of citrate synthase (msed_1522) from metallosphaera sedula in complex with oxaloacetate (see paper)
35% identity, 90% coverage: 46:429/429 of query aligns to 6:370/372 of 6abyA
6abxA Crystal structure of citrate synthase (msed_1522) from metallosphaera sedula in complex with citrate (see paper)
35% identity, 90% coverage: 46:429/429 of query aligns to 6:370/370 of 6abxA
1aj8A Citrate synthase from pyrococcus furiosus (see paper)
37% identity, 88% coverage: 54:429/429 of query aligns to 12:370/371 of 1aj8A
1iomA Crystal structure of citrate synthase from thermus thermophilus hb8 (see paper)
36% identity, 90% coverage: 46:429/429 of query aligns to 4:374/374 of 1iomA
1ixeA Crystal structure of citrate synthase from thermus thermophilus hb8 (see paper)
36% identity, 90% coverage: 46:429/429 of query aligns to 4:371/371 of 1ixeA
P39120 Citrate synthase 2; Citrate synthase II; EC 2.3.3.16 from Bacillus subtilis (strain 168) (see paper)
33% identity, 90% coverage: 46:429/429 of query aligns to 6:371/372 of P39120
2ifcC The structure of the binary complex of oxalateacetate with citrate synthase from the thermophilic archaeon thermolasma acidophilum
35% identity, 87% coverage: 55:429/429 of query aligns to 16:381/382 of 2ifcC
2r9eA The structure of the binary complex of citryl dethia coa and citrate synthase from the thermophilic archaeonthermoplasma acidophilum
35% identity, 87% coverage: 55:429/429 of query aligns to 16:381/381 of 2r9eA
2r26A The structure of the ternary complex of carboxymethyl coenzyme a and oxalateacetate with citrate synthase from the thermophilic archaeonthermoplasma acidophilum
35% identity, 87% coverage: 55:429/429 of query aligns to 16:381/381 of 2r26A
>SMc02087 SMc02087 type II citrate synthase
MSEKSATVTFGGKSADLPVRSGSIGPDVVDIGSLYKQTTMFTYDPGFTSTASCESKITYI
DGDEGVLLHRGFPIEQLAEHGDFLEVCYLLLYGELPTKAQKADFDYRVTHHTMVHEQMSR
FFTGFRRDAHPMAVMCGCVGALSAFYHDSTDITDPHQRMVASLRMIAKMPTIAAMAYKYH
IGQPFVYPKNDLDYASNFLRMCFAVPCEEYVVNPVLARAMDRIFILHADHEQNASTSTVR
LAGSSGANPFACIAAGIACLWGPAHGGANEAALNMLAEIGTVDRIPEYITKAKDKNDPFR
LMGFGHRVYKNYDPRAKIMQKTTHEVLAELGHKDDPLLEVAMELERIALTDEYFIEKKLY
PNIDFYSGITLKALGFPTTMFTVLFALARTVGWIAQWNEMIEDPEQRIGRPRQLYVGAPL
RDYVPISKR
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Lawrence Berkeley National Laboratory