Comparing SMc02776 FitnessBrowser__Smeli:SMc02776 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 1 hits to proteins with known functional sites (download)
6u7lA 2.75 angstrom crystal structure of galactarate dehydratase from escherichia coli. (see paper)
34% identity, 97% coverage: 2:486/501 of query aligns to 2:446/460 of 6u7lA
>SMc02776 FitnessBrowser__Smeli:SMc02776
MPAPSSILLSPDDNVVVATAAIAPGDRLAGGVSAVARIEPGHKAAIRRIDVGEPVVKYGQ
AIGRATSPIAPGEHVHSHNLAFDQGRLAVGAAVPPEAASEADKARTFLGYRRADGRAATR
NYIGIVASVNCSTTVCRAIADEANRRILPKYEGIDGFVPIVHDQGCGMSSTGDGMKNLHR
TLAGYARHANFGGVLMVGLGCEVNQLTLYGQSGAGAEKRHFNIQEAGGSRRSVERALGIL
DEIAKEVAAARRVPIPVSEIIVGLQCGGSDGLSGITANPALGAAVDILAAAGGTAILSET
SEIYGAEHLLRSRAVNETVAVKLDGLIAWWEDYVAMHGASLDNNPSPGNKRGGLTTILEK
SLGAVAKGGRSPLTAVYNYAERVTEPGLVFMDTPGYDPVSATGQVAGGANVIAFTTGRGS
CFGCRPAPSIKLTSNTALYRAMEEDMDIDCGVIASGETTIADLGRGIFELIIETASGRKT
KSELFGYGDNEFVPWHLGATL
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory