Comparing SwissProt__O28523 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 2 hits to proteins with known functional sites (download)
2zktB Structure of ph0037 protein from pyrococcus horikoshii
45% identity, 99% coverage: 4:408/408 of query aligns to 7:381/381 of 2zktB
2zktA Structure of ph0037 protein from pyrococcus horikoshii
48% identity, 46% coverage: 222:408/408 of query aligns to 142:330/330 of 2zktA
Sites not aligning to the query:
>SwissProt__O28523
MPVLLIVVDGLSDRPIDGKTPLSVARKPNLDRLAEMGINGIMDTIAPGIRPGSDTSHLAL
LGYDPYKYYSGRGPIEAAGVGIEIKPGDVAFRANFATVEGEGSIFDKTVVDRRAGRIEDT
SELIKALREIELPVELLVERGTGHRAAVVFRGEGLSDRVSDTDPKAVGKKVKRCVPLADD
AKAKKTAEIVNEFMQKAHEVLENHPLNRERAEKGLLKANALLLRGAGEMPHVPSFKDKTG
LRLCVIAATALIKGVGRVVGADVITPEGATGNKNTNLEAKVKAAINALESYDVVLLHIKA
TDELGHDGDFEGKKAFIEKLDEKIAPLLDLDFSKTCLILTADHSTPIKVKDHTADPVPVV
IVHEDVRRDEVSSFSEFEAYKGGLCRIRGMDLLNIALDLLNIAKKFGA
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory