Comparing Synpcc7942_0166 FitnessBrowser__SynE:Synpcc7942_0166 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 2 hits to proteins with known functional sites (download)
7os3AAA L-asparaginase II protein (see paper)
34% identity, 88% coverage: 18:296/317 of query aligns to 16:330/369 of 7os3AAA
8oriD Crystal structure of rhizobium etli l-asparaginase reaiv (orthorhombic) (see paper)
31% identity, 87% coverage: 9:284/317 of query aligns to 8:303/341 of 8oriD
>Synpcc7942_0166 FitnessBrowser__SynE:Synpcc7942_0166
VSLTKRVQTAPIAVRLLREGILESSHLVEAVVCDRRGRTLFIAGNPEHSSFIRSALKPLQ
ALVVLKTGTMERFGLSDRDLAIICSSHKGSVEQARQAFNILWKADIDQTALQCPTPVGRR
SPLEYNCSGKHAGMLAASKQQNWPLEGYMRRSHPVQQAILSIVGDLLGIPAAEFIVARDD
CGVPTVSMELQQMATLYAHLSSGDSPELERIQRAMTYHPDLIAGEGEFDTELMRLTEGRL
VSKTGAEGVQCIGQVGEGLGLAIKVQDGAKRAKIAVAIQALRQIGWISPAIADLLAEQFM
VIAPCKRLEVDGELTLL
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory