SitesBLAST

SitesBLAST – Find functional sites

SitesBLAST

Comparing Synpcc7942_0459 Synpcc7942_0459 glutathione-dependent formaldehyde dehydrogenase to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 20 (the maximum) hits to proteins with known functional sites (download)

P81601 Alcohol dehydrogenase class-3 chain L; Alcohol dehydrogenase class-III chain L; Glutathione-dependent formaldehyde dehydrogenase; FALDH; FDH; GSH-FDH; S-(hydroxymethyl)glutathione dehydrogenase; EC 1.1.1.1; EC 1.1.1.-; EC 1.1.1.284 from Gadus morhua (Atlantic cod) (see 2 papers)
68% identity, 100% coverage: 1:369/369 of query aligns to 7:375/375 of P81601

query
sites
P81601

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Sites not aligning to the query:

1 modified: N-acetylalanine

P81600 Alcohol dehydrogenase class-3 chain H; Alcohol dehydrogenase class-III chain H; Glutathione-dependent formaldehyde dehydrogenase; FALDH; FDH; GSH-FDH; S-(hydroxymethyl)glutathione dehydrogenase; EC 1.1.1.1; EC 1.1.1.-; EC 1.1.1.284 from Gadus morhua (Atlantic cod) (see 2 papers)
68% identity, 100% coverage: 1:369/369 of query aligns to 7:375/375 of P81600

query
sites
P81600

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Sites not aligning to the query:

1 modified: N-acetylalanine

P80467 Alcohol dehydrogenase class-3; Alcohol dehydrogenase class-III; Glutathione-dependent formaldehyde dehydrogenase; FALDH; FDH; GSH-FDH; S-(hydroxymethyl)glutathione dehydrogenase; EC 1.1.1.1; EC 1.1.1.-; EC 1.1.1.284 from Saara hardwickii (Indian spiny-tailed lizard) (Uromastyx hardwickii) (see paper)
68% identity, 100% coverage: 1:369/369 of query aligns to 5:373/373 of P80467

query
sites
P80467

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Sites not aligning to the query:

1 modified: N-acetylalanine

Q96533 Alcohol dehydrogenase class-3; Alcohol dehydrogenase class-III; Glutathione-dependent formaldehyde dehydrogenase; FALDH; FDH; GSH-FDH; S-(hydroxymethyl)glutathione dehydrogenase; EC 1.1.1.1; EC 1.1.1.-; EC 1.1.1.284 from Arabidopsis thaliana (Mouse-ear cress)
66% identity, 99% coverage: 4:367/369 of query aligns to 11:375/379 of Q96533

query
sites
Q96533

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L

D

D

K

K

V

V

C

C

L

L

G

G

C
|
C

G

G

I

V

T

P

T

T

G

G

I

L

G

G

A

A

V

V

L

W

N

N

T

T

A

A

K

K

V

V

E

E

P

P

G

G

S

S

T

N

V

V

A

A

V

I

F

F

G
|
G

L
|
L

G
|
G

G
x
T

V
|
V

G
|
G

L

L

S

A

V

V

I

A

Q

E

G

G

A

A

V

K

L

T

A

A

K

G

A

A

S

S

R

R

I

I

L

I

A

G

I

I

D
|
D

I

I

N

D

P

S

D

K

K
|
K

A

Y

E

E

F

T

A

A

K

K

Q

K

L

F

G

G

A

V

T

N

D

E

F

F

I

V

N

N

P

P

K

K

D

D

Y

H

D

D

R

K

P

P

I

I

Q

Q

E

E

V

V

I

I

V

V

E

D

L

L

T

T

D

D

G

G

V

V

D

D

Y

Y

S

S

F

F

E

E

A

C

I
|
I

G

G

N

N

V

V

N

S

T

V

M

M

R

R

A

A

L

L

E

E

S

C

C

C

H

H

K

K

G

G

W

W

G

G

E

T

S

S

T

V

I

I

I
x
V

G
|
G

V
|
V

A

A

G

A

A

S

G

G

Q

Q

E

E

I

I

S

S

T

T

R

R

P

P

F

F

Q

Q

L

L

V

V

T

T

G

G

R

R

V

V

W

W

R

K

G

G

S
x
T

A
|
A

F
|
F

G

G

V

F

K

K

G

S

R

R

S

T

Q

Q

L

V

P

P

G

W

Y

L

V

V

E

E

Q

K

Y

Y

L

M

N

N

G

K

Q

E

I

I

K

K

V

V

D

D

E

E

F

Y

V

I

T

T

E

H

T

N

R

L

P

T

L

L

E

G

E

E

I

I

N

N

E

K

A

A

F

F

E

D

D

L

M

L

H

H

A

E

G

G

K

T

V

C

I

L

R
|
R

T

C

V

V

I

L

C47 (= C40) binding
H48 (= H41) binding
H69 (= H62) binding
E70 (= E63) binding
C99 (= C92) binding
C102 (= C95) binding
C105 (= C98) binding
C113 (= C106) binding
C177 (= C169) binding
GLGTVG 202:207 (≠ GLGGVG 194:199) binding
D226 (= D218) binding
K231 (= K223) binding
I272 (= I264) binding
VGV 295:297 (≠ IGV 287:289) binding
TAF 320:322 (≠ SAF 312:314) binding
R372 (= R364) binding

4gl4A Crystal structure of oxidized s-nitrosoglutathione reductase from arabidopsis thalina, complex with nadh
66% identity, 99% coverage: 4:367/369 of query aligns to 10:374/378 of 4gl4A

query
sites
4gl4A

R

K

A

A

I

V

A

A

W

Y

A

E

A

P

G

N

Q

K

P

P

L

L

T

V

I

I

E

E

E

D

V

V

D

Q

V

V

Q

A

A

P

P

P

Q

Q

A

A

G

G

E

E

V

V

M

R

V

I

K

K

L

I

V

L

A

Y

T

T

G

A

V

L

C
|
C

H
|
H

T
|
T

D

D

A

A

F
x
Y

T

T

L

W

S

S

G

G

A

K

D

D

P

P

E

E

G

G

I

L

F

F

P

P

C

C

I

I

L

L

G

G

H
|
H

E
|
E

G

A

A

A

G

G

I

I

V

V

V

E

E

S

V

V

G

G

E

E

G

G

V

V

T

T

S

E

V

V

A

Q

V

A

G

G

D

D

H

H

V

V

I

I

P

P

L

C

Y
|
Y

T

Q

P

A

E

E

C
|
C

G

R

E

E

C
|
C

K

K

F

F

C
|
C

K

K

S

S

G

G

K

K

T

T

N

N

L

L

C
|
C

Q

G

A

K

I

V

R
|
R

A

S

T

A

Q

T

G

G

K

V

G

G

-

I

L

M

M

M

P

N

D

D

G

R

T

K

S

S

R

R

F

F

S

S

L

V

N

N

G

G

Q

K

P

P

I

I

Y

Y

H

H

F

F

M

M

G

G

T

T

S

S

T

T

F

F

S

S

E

Q

Y

Y

T

T

V

V

L

V

P

H

E

D

I

V

A

S

I

V

A

A

K

K

I

I

N

D

P

P

A

T

A

A

A

P

L

L

D

D

K

K

V

V

C

C

L

L

G

G

C
|
C

G

G

I

V

T

P

T
|
T

G

G

I

L

G

G

A

A

V

V

L

W

N

N

T

T

A

A

K

K

V

V

E

E

P

P

G

G

S

S

T

N

V

V

A

A

V

I

F

F

G
|
G

L
|
L

G
|
G

G
x
T

V
|
V

G

G

L

L

S

A

V

V

I

A

Q

E

G

G

A

A

V

K

L

T

A

A

K

G

A

A

S

S

R

R

I

I

L

I

A

G

I
|
I

D
|
D

I
|
I

N
x
D

P

S

D

K

K
|
K

A

Y

E

E

F

T

A

A

K

K

Q

K

L

F

G

G

A

V

T

N

D

E

F

F

I

V

N

N

P

P

K

K

D

D

Y

H

D

D

R

K

P

P

I

I

Q

Q

E

E

V

V

I

I

V

V

E

D

L

L

T

T

D

D

G

G

V

V

D

D

Y

Y

S

S

F

F

E

E

A
x
C

I
|
I

G
|
G

N

N

V

V

N

S

T
x
V

M

M

R

R

A

A

L

L

E

E

S

C

C

C

H

H

K

K

G

G

W

W

G

G

E

T

S

S

T

V

I

I

I
x
V

G
|
G

V
|
V

A

A

G

A

A

S

G

G

Q

Q

E

E

I

I

S

S

T

T

R

R

P

P

F

F

Q

Q

L

L

V

V

T

T

G

G

R

R

V

V

W

W

R

K

G

G

S
x
T

A
|
A

F
|
F

G

G

V

F

K

K

G

S

R

R

S

T

Q

Q

L

V

P

P

G

W

Y

L

V

V

E

E

Q

K

Y

Y

L

M

N

N

G

K

Q

E

I

I

K

K

V

V

D

D

E

E

F

Y

V

I

T

T

E

H

T

N

R

L

P

T

L

L

E

G

E

E

I

I

N

N

E

K

A

A

F

F

E

D

D

L

M

L

H

H

A

E

G

G

K

T

V

C

I

L

R
|
R

T

C

V

V

I

L

active site: C46 (= C40), H47 (= H41), T48 (= T42), Y51 (≠ F45), H68 (= H62), E69 (= E63), C98 (= C92), C101 (= C95), C104 (= C98), C112 (= C106), R116 (= R110), C176 (= C169), T180 (= T173), R371 (= R364)
binding 1,4-dihydronicotinamide adenine dinucleotide: H47 (= H41), Y94 (= Y88), T180 (= T173), G201 (= G194), L202 (= L195), G203 (= G196), T204 (≠ G197), V205 (= V198), I224 (= I217), D225 (= D218), I226 (= I219), D227 (≠ N220), K230 (= K223), C270 (≠ A263), I271 (= I264), G272 (= G265), V276 (≠ T269), V294 (≠ I287), G295 (= G288), V296 (= V289), T319 (≠ S312), A320 (= A313), F321 (= F314), R371 (= R364)
binding zinc ion: C46 (= C40), H68 (= H62), E69 (= E63), C98 (= C92), C101 (= C95), C104 (= C98), C112 (= C106), C176 (= C169)

3ukoA Crystal structure of s-nitrosoglutathione reductase from arabidopsis thaliana, complex with nadh
66% identity, 99% coverage: 4:367/369 of query aligns to 10:374/378 of 3ukoA

query
sites
3ukoA

R

K

A

A

I

V

A

A

W

Y

A

E

A

P

G

N

Q

K

P

P

L

L

T

V

I

I

E

E

E

D

V

V

D

Q

V

V

Q

A

A

P

P

P

Q

Q

A

A

G

G

E

E

V

V

M

R

V

I

K

K

L

I

V

L

A

Y

T

T

G

A

V

L

C
|
C

H
|
H

T
|
T

D

D

A

A

F
x
Y

T

T

L

W

S

S

G

G

A

K

D

D

P

P

E

E

G

G

I

L

F

F

P

P

C

C

I

I

L

L

G

G

H
|
H

E
|
E

G

A

A

A

G

G

I

I

V

V

V

E

E

S

V

V

G

G

E

E

G

G

V

V

T

T

S

E

V

V

A

Q

V

A

G

G

D

D

H

H

V

V

I

I

P

P

L

C

Y
|
Y

T

Q

P

A

E

E

C
|
C

G

R

E

E

C
|
C

K

K

F

F

C
|
C

K

K

S

S

G

G

K

K

T

T

N

N

L

L

C
|
C

Q

G

A

K

I

V

R
|
R

A

S

T

A

Q

T

G

G

K

V

G

G

-

I

L

M

M

M

P

N

D

D

G

R

T

K

S

S

R

R

F

F

S

S

L

V

N

N

G

G

Q

K

P

P

I

I

Y

Y

H

H

F

F

M

M

G

G

T

T

S

S

T

T

F

F

S

S

E

Q

Y

Y

T

T

V

V

L

V

P

H

E

D

I

V

A

S

I

V

A

A

K

K

I

I

N

D

P

P

A

T

A

A

A

P

L

L

D

D

K

K

V

V

C

C

L

L

G

G

C
|
C

G

G

I

V

T

P

T
|
T

G

G

I

L

G

G

A

A

V

V

L

W

N

N

T

T

A

A

K

K

V

V

E

E

P

P

G

G

S

S

T

N

V

V

A

A

V

I

F

F

G
|
G

L
|
L

G
|
G

G
x
T

V
|
V

G

G

L

L

S

A

V

V

I

A

Q

E

G

G

A

A

V

K

L

T

A

A

K

G

A

A

S

S

R

R

I

I

L

I

A

G

I
|
I

D
|
D

I
|
I

N

D

P

S

D

K

K
|
K

A

Y

E

E

F

T

A

A

K

K

Q

K

L

F

G

G

A

V

T

N

D

E

F

F

I

V

N

N

P

P

K

K

D

D

Y

H

D

D

R

K

P

P

I

I

Q

Q

E

E

V

V

I

I

V

V

E

D

L

L

T

T

D

D

G

G

V

V

D

D

Y

Y

S

S

F

F

E

E

A
x
C

I
|
I

G
|
G

N

N

V

V

N

S

T
x
V

M

M

R

R

A

A

L

L

E

E

S

C

C

C

H

H

K

K

G

G

W

W

G

G

E

T

S

S

T

V

I

I

I
x
V

G
|
G

V
|
V

A

A

G

A

A

S

G

G

Q

Q

E

E

I

I

S

S

T

T

R

R

P

P

F

F

Q

Q

L

L

V

V

T

T

G

G

R

R

V

V

W

W

R

K

G

G

S
x
T

A
|
A

F
|
F

G

G

V

F

K

K

G

S

R

R

S

T

Q

Q

L

V

P

P

G

W

Y

L

V

V

E

E

Q

K

Y

Y

L

M

N

N

G

K

Q

E

I

I

K

K

V

V

D

D

E

E

F

Y

V

I

T

T

E

H

T

N

R

L

P

T

L

L

E

G

E

E

I

I

N

N

E

K

A

A

F

F

E

D

D

L

M

L

H

H

A

E

G

G

K

T

V

C

I

L

R
|
R

T

C

V

V

I

L

active site: C46 (= C40), H47 (= H41), T48 (= T42), Y51 (≠ F45), H68 (= H62), E69 (= E63), C98 (= C92), C101 (= C95), C104 (= C98), C112 (= C106), R116 (= R110), C176 (= C169), T180 (= T173), R371 (= R364)
binding nicotinamide-adenine-dinucleotide: H47 (= H41), Y94 (= Y88), T180 (= T173), G201 (= G194), L202 (= L195), G203 (= G196), T204 (≠ G197), V205 (= V198), I224 (= I217), D225 (= D218), I226 (= I219), K230 (= K223), C270 (≠ A263), I271 (= I264), G272 (= G265), V276 (≠ T269), V294 (≠ I287), G295 (= G288), V296 (= V289), T319 (≠ S312), A320 (= A313), F321 (= F314), R371 (= R364)
binding zinc ion: C46 (= C40), H68 (= H62), E69 (= E63), C98 (= C92), C101 (= C95), C104 (= C98), C112 (= C106), C176 (= C169)

P19854 Alcohol dehydrogenase class-3; Alcohol dehydrogenase 5; Alcohol dehydrogenase class-III; Glutathione-dependent formaldehyde dehydrogenase; FALDH; FDH; GSH-FDH; S-(hydroxymethyl)glutathione dehydrogenase; EC 1.1.1.1; EC 1.1.1.-; EC 1.1.1.284 from Equus caballus (Horse) (see 2 papers)
66% identity, 100% coverage: 1:369/369 of query aligns to 6:374/374 of P19854

query
sites
P19854

M

I

K

K

S

C

R

K

A

A

I

V

A

A

W

W

A

E

A

A

G

G

Q

K

P

P

L

V

T

S

I

I

E

E

V

V

D

E

V

V

Q

A

A

P

P

P

Q

K

A

A

G

H

E

E

V

V

M

R

V

I

K

K

L

I

V

I

A

A

T

T

G

A

V

V

C

C

H

H

T

T

D

D

A

A

F

Y

T

T

L

L

S

S

G

G

A

A

D

D

P

P

E

E

G

G

I

S

F

F

P

P

C

V

I

I

L

L

G

G

H

H

E

E

G

G

A

A

G

G

I

I

V

V

V

E

E

S

V

V

G

G

E

E

G

G

V

V

T

T

S

K

V

L

A

K

V

A

G

G

D

D

H

T

V

V

I

I

P

P

L

L

Y

Y

T

I

P

P

E

Q

C

C

G

G

E

E

C

C

K

K

F

F

C

C

K

L

S

N

G

P

K

Q

T

T

N

N

L

L

C

C

Q

Q

A

K

I

I

R

R

A

T

T

T

Q

Q

G

G

K

K

G

G

L

L

M

M

P

P

D

D

G

G

T

T

S

S

R

R

F

F

S

T

L

C

N

K

G

G

Q

K

P

T

I

I

Y

L

H

H

F

Y

M

M

G

G

T

T

S

S

T

T

F

F

S

S

E

E

Y

Y

T

T

V

V

L

V

P

A

E

D

I

I

A

S

I

V

A

A

K

K

I

I

N

D

P

P

A

L

A

A

A

P

L

L

D

D

K

K

V

V

C

C

L

L

G

G

C

C

G

G

I

V

T

S

T

T

G

G

I

Y

G

G

A

A

V

A

L

V

N

N

T

T

A

A

K

K

V

V

E

E

P

P

G

G

S

S

T

T

V

C

A

A

V

I

F

F

G

G

L

L

G

G

V

V

G

G

L

L

S

A

V

V

I

I

Q

M

G

G

A

C

V

K

L

V

A

A

K

G

A

A

S

S

R

R

I

I

L

I

A

G

I

V

D

D

I

I

N

N

P

K

D

D

K

K

A

F

E

A

F

K

A

A

K

K

Q

E

L

F

G

G

A

A

T

S

D

E

F

C

I

I

N

N

P

P

K

Q

D

D

Y

F

D

S

R

K

P

P

I

I

Q

Q

E

E

V

V

I

L

V

I

E

E

L

M

T

T

D

D

G

G

V

V

D

D

Y

Y

S

S

F

F

E

E

A

C

I

I

G

G

N

N

V

V

N

K

T

V

M

M

R

R

A

A

L

L

E

E

S

A

C

C

H

H

K

K

G

G

W

W

G

G

E

V

S

S

T

V

I

V

G

G

V

V

A

A

G

A

A

S

G

G

Q

E

E

E

I

I

S

A

T

T

R

R

P

P

F

F

Q

Q

L

L

V

V

T

T

G

G

R

R

V

T

W

W

R

K

G

G

S

T

A

A

F

F

G

G

V

W

K

K

G

S

R

V

S

E

Q

S

L

I

P

P

G

K

Y

L

V

V

E

S

Q

E

Y

Y

L

M

N

S

G

K

Q

K

I

I

K

K

V

V

D

D

E

E

F

F

V

V

T

T

E

H

T

S

R

L

P

S

L

F

E

D

E

Q

I

I

N

N

E

E

A

A

F

F

E

E

D

L

M

M

H

H

A

A

G

G

K

K

V

S

I

I

R

R

T

T

V

V

I

V

T

K

F

L

Sites not aligning to the query:

1 modified: Initiator methionine, Removed
2 modified: N-acetylserine

2fzeA Crystal structure of the binary complex of human glutathione-dependent formaldehyde dehydrogenase with adp-ribose (see paper)
67% identity, 99% coverage: 1:367/369 of query aligns to 5:371/373 of 2fzeA

query
sites
2fzeA

M

I

K

K

S

C

R

K

A

A

I

V

A

A

W

W

A

E

A

A

G

G

Q

K

P

P

L

L

T

S

I

I

E

E

V

I

D

E

V

V

Q

A

A

P

P

P

Q

K

A

A

G

H

E

E

V

V

M

R

V

I

K

K

L

I

V

I

A

A

T

T

G

A

V

V

C
|
C

H
|
H

T
|
T

D

D

A

A

F
x
Y

T

T

L

L

S

S

G

G

A

A

D

D

P

P

E

E

G

G

I

C

F

F

P

P

C

V

I

I

L

L

G

G

H
|
H

E
|
E

G

G

A

A

G

G

I

I

V

V

V

E

E

S

V

V

G

G

E

E

G

G

V

V

T

T

S

K

V

L

A
x
K

V

A

G

G

D

D

H

T

V

V

I

I

P

P

L

L

Y

Y

T

I

P

P

E

Q

C
|
C

G

G

E

E

C
|
C

K

K

F

F

C
|
C

K

L

S

N

G

P

K

K

T

T

N

N

L

L

C
|
C

Q

Q

A

K

I

I

R
|
R

A

V

T

T

Q

Q

G

G

K

K

G

G

L

L

M

M

P

P

D

D

G

G

T

T

S

S

R

R

F

F

S

T

L

C

N

K

G

G

Q

K

P

T

I

I

Y

L

H

H

F

Y

M

M

G

G

T

T

S

S

T

T

F

F

S

S

E

E

Y

Y

T

T

V

V

L

V

P

A

E

D

I

I

A

S

I

V

A

A

K
|
K

I

I

N

D

P

P

A

L

A

A

A

P

L

L

D

D

K

K

V

V

C

C

L

L

G

G

C
|
C

G

G

I

I

T

S

T
|
T

G

G

I

Y

G

G

A

A

V

A

L

V

N

N

T

T

A

A

K

K

V

L

E

E

P

P

G

G

S

S

T

V

V

C

A

A

V

V

F

F

G
|
G

L
|
L

G
|
G

V
|
V

G

G

L

L

S

A

V

V

I

I

Q

M

G

G

A

C

V

K

L

V

A

A

K

G

A

A

S

S

R

R

I

I

L

I

A

G

I
x
V

D
|
D

I
|
I

N

N

P

K

D

D

K
|
K

A

F

E

A

F

R

A

A

K

K

Q

E

L

F

G

G

A

A

T

T

D

E

F

C

I

I

N

N

P

P

K

Q

D

D

Y

F

D

S

R

K

P

P

I

I

Q

Q

E

E

V

V

I

L

V

I

E

E

L

M

T

T

D

D

G

G

V

V

D

D

Y

Y

S

S

F

F

E

E

A
x
C

I
|
I

G

G

N

N

V

V

N

K

T
x
V

M

M

R

R

A

A

L

L

E

E

S

A

C

C

H

H

K

K

G

G

W

W

G

G

E

V

S

S

T

V

I

V

I
x
V

G
|
G

V
|
V

A

A

G

A

A

S

G

G

Q

E

E

E

I

I

S

A

T

T

R

R

P

P

F

F

Q

Q

L

L

V

V

T

T

G

G

R

R

V

T

W

W

R

K

G

G

S

T

A

A

F

F

G

G

V

W

K

K

G

S

R

V

S

E

Q

S

L

V

P

P

G

K

Y

L

V

V

E

S

Q

E

Y

Y

L

M

N

S

G

K

Q

K

I

I

K

K

V

V

D

D

E

E

F

F

V

V

T

T

E

H

T

N

R

L

P

S

L

F

E

D

E

E

I

I

N

N

E

K

A

A

F

F

E

E

D

L

M

M

H

H

A

S

G

G

K

K

V

S

I

I

R
|
R

T

T

V

V

I

V

active site: C44 (= C40), H45 (= H41), T46 (= T42), Y49 (≠ F45), H66 (= H62), E67 (= E63), C96 (= C92), C99 (= C95), C102 (= C98), C110 (= C106), R114 (= R110), C173 (= C169), T177 (= T173), R368 (= R364)
binding adenosine-5-diphosphoribose: H45 (= H41), G198 (= G194), L199 (= L195), G200 (= G196), G201 (= G197), V202 (= V198), V221 (≠ I217), D222 (= D218), I223 (= I219), K227 (= K223), C267 (≠ A263), I268 (= I264), V273 (≠ T269), V291 (≠ I287), G292 (= G288), V293 (= V289), R368 (= R364)
binding phosphate ion: K83 (≠ A79), K158 (= K154)
binding zinc ion: H66 (= H62), C96 (= C92), C99 (= C95), C102 (= C98), C110 (= C106), C173 (= C169)

1mc5A Ternary complex of human glutathione-dependent formaldehyde dehydrogenase with s-(hydroxymethyl)glutathione and nadh (see paper)
67% identity, 99% coverage: 1:367/369 of query aligns to 5:371/373 of 1mc5A

query
sites
1mc5A

M

I

K

K

S

C

R

K

A

A

I

V

A

A

W

W

A

E

A

A

G

G

Q

K

P

P

L

L

T

S

I

I

E

E

V

I

D

E

V

V

Q

A

A

P

P

P

Q

K

A

A

G

H

E

E

V

V

M

R

V

I

K

K

L

I

V

I

A

A

T

T

G

A

V

V

C
|
C

H
|
H

T
|
T

D

D

A

A

F
x
Y

T

T

L

L

S

S

G

G

A

A

D
|
D

P
|
P

E
|
E

G

G

I

C

F

F

P

P

C

V

I

I

L

L

G

G

H
|
H

E
|
E

G

G

A

A

G

G

I

I

V

V

V

E

E

S

V

V

G

G

E

E

G

G

V

V

T

T

S

K

V

L

A

K

V

A

G

G

D

D

H

T

V

V

I

I

P

P

L

L

Y
|
Y

T
x
I

P

P

E

Q

C
|
C

G

G

E

E

C
|
C

K

K

F

F

C
|
C

K

L

S

N

G

P

K

K

T

T

N

N

L

L

C
|
C

Q

Q

A

K

I

I

R
|
R

A

V

T

T

Q

Q

G

G

K

K

G

G

L

L

M

M

P

P

D

D

G

G

T

T

S

S

R

R

F

F

S

T

L

C

N

K

G

G

Q

K

P

T

I

I

Y

L

H

H

F

Y

M

M

G

G

T

T

S

S

T

T

F

F

S

S

E

E

Y

Y

T

T

V

V

L

V

P

A

E

D

I

I

A

S

I

V

A

A

K

K

I

I

N

D

P

P

A

L

A

A

A

P

L

L

D

D

K

K

V

V

C

C

L

L

G

G

C
|
C

G

G

I

I

T

S

T
|
T

G

G

I

Y

G

G

A

A

V

A

L

V

N

N

T

T

A

A

K

K

V

L

E

E

P

P

G

G

S

S

T

V

V

C

A

A

V

V

F

F

G
|
G

L
|
L

G
|
G

V
|
V

G

G

L

L

S

A

V

V

I

I

Q

M

G

G

A

C

V

K

L

V

A

A

K

G

A

A

S

S

R

R

I

I

L

I

A

G

I
x
V

D
|
D

I
|
I

N

N

P

K

D

D

K
|
K

A

F

E

A

F

R

A

A

K

K

Q

E

L

F

G

G

A

A

T

T

D

E

F

C

I

I

N

N

P

P

K

Q

D

D

Y

F

D

S

R

K

P

P

I

I

Q

Q

E

E

V

V

I

L

V

I

E

E

L

M

T

T

D

D

G

G

V

V

D

D

Y

Y

S

S

F

F

E

E

A
x
C

I
|
I

G
|
G

N

N

V

V

N

K

T

V

M

M

R

R

A

A

L

L

E

E

S

A

C

C

H

H

K

K

G

G

W

W

G

G

E

V

S

S

T

V

I

V

I
x
V

G
|
G

V
|
V

A

A

G

A

A

S

G

G

Q

E

E

E

I

I

S

A

T

T

R

R

P

P

F

F

Q

Q

L

L

V

V

T

T

G

G

R

R

V

T

W

W

R

K

G

G

S
x
T

A
|
A

F
|
F

G

G

V

W

K

K

G

S

R

V

S

E

Q

S

L

V

P

P

G

K

Y

L

V

V

E

S

Q

E

Y

Y

L

M

N

S

G

K

Q

K

I

I

K

K

V

V

D

D

E

E

F

F

V

V

T

T

E

H

T

N

R

L

P

S

L

F

E

D

E

E

I

I

N

N

E

K

A

A

F

F

E

E

D

L

M

M

H

H

A

S

G

G

K

K

V

S

I

I

R
|
R

T

T

V

V

I

V

active site: C44 (= C40), H45 (= H41), T46 (= T42), Y49 (≠ F45), H66 (= H62), E67 (= E63), C96 (= C92), C99 (= C95), C102 (= C98), C110 (= C106), R114 (= R110), C173 (= C169), T177 (= T173), R368 (= R364)
binding 2-amino-4-[1-carboxymethyl-carbamoyl)-2-hydroxymethylsulfanyl-ethylcarbamoyl]-butyric acid: T46 (= T42), D55 (= D51), P56 (= P52), E57 (= E53), H66 (= H62), Y92 (= Y88), I93 (≠ T89), R114 (= R110), C173 (= C169), V293 (= V289), A317 (= A313)
binding nicotinamide-adenine-dinucleotide: C44 (= C40), H45 (= H41), T46 (= T42), Y92 (= Y88), C173 (= C169), T177 (= T173), G198 (= G194), L199 (= L195), G200 (= G196), G201 (= G197), V202 (= V198), V221 (≠ I217), D222 (= D218), I223 (= I219), K227 (= K223), C267 (≠ A263), I268 (= I264), G269 (= G265), V291 (≠ I287), G292 (= G288), V293 (= V289), T316 (≠ S312), A317 (= A313), F318 (= F314), R368 (= R364)
binding zinc ion: C44 (= C40), H66 (= H62), C96 (= C92), C99 (= C95), C102 (= C98), C110 (= C106), C173 (= C169)

1ma0A Ternary complex of human glutathione-dependent formaldehyde dehydrogenase with NAD+ and dodecanoic acid (see paper)
67% identity, 99% coverage: 1:367/369 of query aligns to 5:371/373 of 1ma0A

query
sites
1ma0A

M

I

K

K

S

C

R

K

A

A

I

V

A

A

W

W

A

E

A

A

G

G

Q

K

P

P

L

L

T

S

I

I

E

E

V

I

D

E

V

V

Q

A

A

P

P

P

Q

K

A

A

G

H

E

E

V

V

M

R

V

I

K

K

L

I

V

I

A

A

T

T

G

A

V

V

C
|
C

H
|
H

T
|
T

D

D

A

A

F
x
Y

T

T

L

L

S

S

G

G

A

A

D

D

P

P

E

E

G

G

I

C

F

F

P

P

C

V

I

I

L

L

G

G

H
|
H

E
|
E

G

G

A

A

G

G

I

I

V

V

V

E

E

S

V

V

G

G

E

E

G

G

V

V

T

T

S

K

V

L

A

K

V

A

G

G

D

D

H

T

V

V

I

I

P

P

L

L

Y
|
Y

T

I

P

P

E

Q

C
|
C

G

G

E

E

C
|
C

K

K

F

F

C
|
C

K

L

S

N

G

P

K

K

T

T

N

N

L

L

C
|
C

Q

Q

A

K

I

I

R
|
R

A

V

T

T

Q

Q

G

G

K

K

G

G

L

L

M

M

P

P

D

D

G

G

T

T

S

S

R

R

F

F

S

T

L

C

N

K

G

G

Q

K

P

T

I

I

Y

L

H

H

F

Y

M

M

G

G

T

T

S

S

T

T

F

F

S

S

E

E

Y

Y

T

T

V

V

L

V

P

A

E

D

I

I

A

S

I

V

A

A

K

K

I

I

N

D

P

P

A

L

A

A

A

P

L

L

D

D

K

K

V

V

C

C

L

L

G

G

C
|
C

G

G

I

I

T

S

T
|
T

G

G

I

Y

G

G

A

A

V

A

L

V

N

N

T

T

A

A

K

K

V

L

E

E

P

P

G

G

S

S

T

V

V

C

A

A

V

V

F

F

G
|
G

L
|
L

G
|
G

V
|
V

G

G

L

L

S

A

V

V

I

I

Q

M

G

G

A

C

V

K

L

V

A

A

K

G

A

A

S

S

R

R

I

I

L

I

A

G

I
x
V

D
|
D

I
|
I

N

N

P

K

D

D

K
|
K

A

F

E

A

F

R

A

A

K

K

Q

E

L

F

G

G

A

A

T

T

D

E

F

C

I

I

N

N

P

P

K

Q

D

D

Y

F

D

S

R

K

P

P

I

I

Q

Q

E

E

V

V

I

L

V

I

E

E

L

M

T

T

D

D

G

G

V

V

D

D

Y

Y

S

S

F

F

E

E

A
x
C

I
|
I

G
|
G

N

N

V

V

N

K

T

V

M

M

R

R

A

A

L

L

E

E

S

A

C

C

H

H

K

K

G

G

W

W

G

G

E

V

S

S

T

V

I

V

I
x
V

G
|
G

V
|
V

A

A

G

A

A

S

G

G

Q

E

E

E

I

I

S

A

T

T

R

R

P

P

F

F

Q

Q

L

L

V

V

T

T

G

G

R

R

V

T

W

W

R

K

G

G

S
x
T

A
|
A

F
|
F

G

G

V

W

K

K

G

S

R

V

S

E

Q

S

L

V

P

P

G

K

Y

L

V

V

E

S

Q

E

Y

Y

L

M

N

S

G

K

Q

K

I

I

K

K

V

V

D

D

E

E

F

F

V

V

T

T

E

H

T

N

R

L

P

S

L

F

E

D

E

E

I

I

N

N

E

K

A

A

F

F

E

E

D

L

M

M

H

H

A

S

G

G

K

K

V

S

I

I

R
|
R

T

T

V

V

I

V

active site: C44 (= C40), H45 (= H41), T46 (= T42), Y49 (≠ F45), H66 (= H62), E67 (= E63), C96 (= C92), C99 (= C95), C102 (= C98), C110 (= C106), R114 (= R110), C173 (= C169), T177 (= T173), R368 (= R364)
binding nicotinamide-adenine-dinucleotide: H45 (= H41), Y92 (= Y88), T177 (= T173), G198 (= G194), L199 (= L195), G200 (= G196), G201 (= G197), V202 (= V198), V221 (≠ I217), D222 (= D218), I223 (= I219), K227 (= K223), C267 (≠ A263), I268 (= I264), G269 (= G265), V291 (≠ I287), G292 (= G288), V293 (= V289), T316 (≠ S312), A317 (= A313), F318 (= F314), R368 (= R364)
binding zinc ion: C44 (= C40), H66 (= H62), E67 (= E63), C96 (= C92), C99 (= C95), C102 (= C98), C110 (= C106), C173 (= C169)

1m6wA Binary complex of human glutathione-dependent formaldehyde dehydrogenase and 12-hydroxydodecanoic acid (see paper)
67% identity, 99% coverage: 1:367/369 of query aligns to 5:371/373 of 1m6wA

query
sites
1m6wA

M

I

K

K

S

C

R

K

A

A

I

V

A

A

W

W

A

E

A

A

G

G

Q

K

P

P

L

L

T

S

I

I

E

E

V

I

D

E

V

V

Q

A

A

P

P

P

Q

K

A

A

G

H

E

E

V

V

M

R

V

I

K

K

L

I

V

I

A

A

T

T

G

A

V

V

C
|
C

H
|
H

T
|
T

D

D

A

A

F
x
Y

T

T

L

L

S

S

G

G

A

A

D

D

P

P

E

E

G

G

I

C

F

F

P

P

C

V

I

I

L

L

G

G

H
|
H

E
|
E

G

G

A

A

G

G

I

I

V

V

V

E

E

S

V

V

G

G

E

E

G

G

V

V

T

T

S

K

V

L

A

K

V

A

G

G

D

D

H

T

V

V

I

I

P

P

L

L

Y
|
Y

T
x
I

P

P

E

Q

C
|
C

G

G

E

E

C
|
C

K

K

F

F

C
|
C

K

L

S

N

G

P

K

K

T

T

N

N

L
|
L

C
|
C

Q
|
Q

A

K

I

I

R
|
R

A

V

T

T

Q

Q

G

G

K

K

G

G

L

L

M

M

P

P

D

D

G

G

T

T

S

S

R

R

F

F

S

T

L

C

N

K

G

G

Q

K

P

T

I

I

Y

L

H

H

F

Y

M
|
M

G

G

T

T

S

S

T

T

F

F

S

S

E

E

Y

Y

T

T

V

V

L

V

P

A

E

D

I

I

A

S

I

V

A

A

K

K

I

I

N

D

P

P

A

L

A

A

A

P

L

L

D

D

K

K

V

V

C

C

L

L

G

G

C
|
C

G

G

I

I

T

S

T
|
T

G

G

I

Y

G

G

A

A

V

A

L

V

N

N

T

T

A

A

K

K

V

L

E

E

P

P

G

G

S

S

T

V

V

C

A

A

V

V

F

F

G

G

L

L

G

G

V

V

G

G

L

L

S

A

V

V

I

I

Q

M

G

G

A

C

V

K

L

V

A

A

K

G

A

A

S

S

R

R

I

I

L

I

A

G

I

V

D

D

I

I

N

N

P

K

D

D

K

K

A

F

E

A

F

R

A

A

K

K

Q

E

L

F

G

G

A

A

T

T

D

E

F

C

I

I

N

N

P

P

K

Q

D

D

Y

F

D

S

R

K

P

P

I

I

Q

Q

E

E

V

V

I

L

V

I

E

E

L

M

T

T

D

D

G

G

V

V

D

D

Y

Y

S

S

F

F

E

E

A

C

I

I

G

G

N

N

V

V

N

K

T

V

M

M

R

R

A

A

L

L

E

E

S

A

C

C

H

H

K

K

G

G

W

W

G

G

E

V

S

S

T

V

I

V

G
|
G

V
|
V

A

A

G

A

A

S

G

G

Q

E

E

E

I

I

S

A

T

T

R

R

P

P

F

F

Q

Q

L

L

V

V

T

T

G

G

R

R

V

T

W

W

R

K

G

G

S

T

A
|
A

F

F

G

G

V

W

K

K

G

S

R

V

S

E

Q

S

L

V

P

P

G

K

Y

L

V

V

E

S

Q

E

Y

Y

L

M

N

S

G

K

Q

K

I

I

K

K

V

V

D

D

E

E

F

F

V

V

T

T

E

H

T

N

R

L

P

S

L

F

E

D

E

E

I

I

N

N

E

K

A

A

F

F

E

E

D

L

M

M

H

H

A

S

G

G

K

K

V

S

I

I

R
|
R

T

T

V

V

I

V

active site: C44 (= C40), H45 (= H41), T46 (= T42), Y49 (≠ F45), H66 (= H62), E67 (= E63), C96 (= C92), C99 (= C95), C102 (= C98), C110 (= C106), R114 (= R110), C173 (= C169), T177 (= T173), R368 (= R364)
binding 12-hydroxydodecanoic acid: T46 (= T42), H66 (= H62), Y92 (= Y88), I93 (≠ T89), L109 (= L105), Q111 (= Q107), R114 (= R110), M140 (= M136), C173 (= C169), G292 (= G288), V293 (= V289), A317 (= A313)
binding zinc ion: C44 (= C40), H66 (= H62), C96 (= C92), C99 (= C95), C102 (= C98), C110 (= C106), C173 (= C169)

3qj5A S-nitrosoglutathione reductase (gsnor) in complex with n6022 (see paper)
67% identity, 99% coverage: 1:367/369 of query aligns to 4:370/372 of 3qj5A

query
sites
3qj5A

M

I

K

K

S

C

R

K

A

A

I

V

A

A

W

W

A

E

A

A

G

G

Q

K

P

P

L

L

T

S

I

I

E

E

V

I

D

E

V

V

Q

A

A

P

P

P

Q

K

A

A

G

H

E

E

V

V

M

R

V

I

K

K

L

I

V

I

A

A

T

T

G

A

V

V

C
|
C

H
|
H

T
|
T

D

D

A

A

F
x
Y

T

T

L

L

S

S

G

G

A

A

D

D

P

P

E

E

G

G

I

C

F

F

P

P

C

V

I

I

L

L

G

G

H
|
H

E
|
E

G

G

A

A

G

G

I

I

V

V

V

E

E

S

V

V

G

G

E

E

G

G

V

V

T

T

S

K

V

L

A

K

V

A

G

G

D

D

H

T

V

V

I

I

P

P

L

L

Y
|
Y

T
x
I

P

P

E

Q

C
|
C

G

G

E

E

C
|
C

K

K

F

F

C
|
C

K

L

S

N

G

P

K

K

T

T

N

N