SitesBLAST

Q7CP78 2-iminobutanoate/2-iminopropanoate deaminase; Enamine/imine deaminase; EC 3.5.99.10 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
53% identity, 93% coverage: 8:128/130 of query aligns to 7:126/128 of Q7CP78

query
sites
Q7CP78

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Y17 (= Y18) mutation to F: Deaminase activity is defective. At pH 8, strongly reduces the increase in rate of 2-ketobutyrate formation over the rate of IlvA alone. At pH 9.5, moderately reduces the increase in rate of 2-ketobutyrate formation over the rate of IlvA alone.
R105 (= R107) mutation to A: Deaminase activity is defective. At pH 8 and 9.5, strongly reduces the increase in rate of 2-ketobutyrate formation over the rate of IlvA alone.
E120 (= E122) Important for catalytic activity at high pH; mutation to A: Deaminase activity is defective. At pH 8, moderately reduces the increase in rate of 2-ketobutyrate formation over the rate of IlvA alone. At pH 9.5, strongly reduces the increase in rate of 2-ketobutyrate formation over the rate of IlvA alone.; mutation to K: Deaminase activity is defective. At pH 8, moderately reduces the increase in rate of 2-ketobutyrate formation over the rate of IlvA alone. At pH 9.5, strongly reduces the increase in rate of 2-ketobutyrate formation over the rate of IlvA alone.

Q94JQ4 Reactive Intermediate Deaminase A, chloroplastic; 2-iminobutanoate/2-iminopropanoate deaminase; EC 3.5.99.10 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
51% identity, 98% coverage: 3:129/130 of query aligns to 64:187/187 of Q94JQ4

query
sites
Q94JQ4

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R165 (= R107) mutation to A: Loss of activity.

3vczB 1.80 angstrom resolution crystal structure of a putative translation initiation inhibitor from vibrio vulnificus cmcp6
48% identity, 96% coverage: 4:128/130 of query aligns to 2:126/127 of 3vczB

query
sites
3vczB

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binding magnesium ion: D79 (= D84), N81 (≠ E86)

2uynA Crystal structure of e. Coli tdcf with bound 2-ketobutyrate (see paper)
48% identity, 97% coverage: 3:128/130 of query aligns to 1:125/127 of 2uynA

query
sites
2uynA

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binding 2-ketobutyric acid: F83 (= F88), R104 (= R107), S105 (≠ A108), C106 (= C109)

2uykC Crystal structure of e. Coli tdcf with bound serine (see paper)
48% identity, 97% coverage: 3:128/130 of query aligns to 1:125/127 of 2uykC

query
sites
2uykC

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binding serine: R104 (= R107), S105 (≠ A108), C106 (= C109)

2b33B Crystal structure of a putative endoribonuclease (tm0215) from thermotoga maritima msb8 at 2.30 a resolution
50% identity, 93% coverage: 8:128/130 of query aligns to 6:123/126 of 2b33B

query
sites
2b33B

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binding calcium ion: D35 (= D38), E37 (≠ A40)

P52759 2-iminobutanoate/2-iminopropanoate deaminase; Liver perchloric acid-soluble protein; L-PSP; Reactive intermediate imine deaminase A homolog; Translation inhibitor L-PSP ribonuclease; UK114 antigen homolog; rp14.5; EC 3.5.99.10 from Rattus norvegicus (Rat) (see paper)
48% identity, 98% coverage: 1:128/130 of query aligns to 4:128/137 of P52759

query
sites
P52759

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Sites not aligning to the query:

1 modified: Initiator methionine, Removed
2 modified: N-acetylserine

3k0tC Crystal structure of pspto -psp protein in complex with d-beta-glucose from pseudomonas syringae pv. Tomato str. Dc3000 (see paper)
48% identity, 98% coverage: 3:129/130 of query aligns to 1:123/124 of 3k0tC

query
sites
3k0tC

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binding beta-D-glucopyranose: Y16 (= Y18), G30 (= G33), I32 (= I35), F83 (= F88), R101 (= R107), R111 (≠ K117), E116 (= E122)

P80601 2-iminobutanoate/2-iminopropanoate deaminase; 14.3 kDa perchloric acid soluble protein; Translation inhibitor L-PSP ribonuclease; UK114 antigen; EC 3.5.99.10; EC 3.1.-.- from Capra hircus (Goat) (see paper)
46% identity, 98% coverage: 1:128/130 of query aligns to 4:128/137 of P80601

query
sites
P80601

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Sites not aligning to the query:

1 modified: Initiator methionine, Removed
2 modified: N-acetylserine

5v4dA Crystal structure of the protein of unknown function of the conserved rid protein family yyfa from yersinia pestis
46% identity, 96% coverage: 3:127/130 of query aligns to 3:125/127 of 5v4dA

query
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5v4dA

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binding calcium ion: D91 (≠ A93), D95 (≠ T97)

5hp8A Crystal structures of rida in complex with pyruvate (see paper)
50% identity, 85% coverage: 19:129/130 of query aligns to 1:108/108 of 5hp8A

query
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5hp8A

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binding pyruvic acid: R86 (= R107), T88 (≠ C109)

A0A1J1DL12 2-iminobutanoate/2-iminopropanoate deaminase; Allergen Der f 34; Enamine/imine deaminase; Allergen Der f 34.0101; EC 3.5.99.10 from Dermatophagoides farinae (American house dust mite) (see paper)
39% identity, 98% coverage: 3:129/130 of query aligns to 4:127/128 of A0A1J1DL12

query
sites
A0A1J1DL12

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Y19 (= Y18) mutation to A: Loss of imine deaminase activity; when associated with A-33; A-59; A-91; A-105; A-114 and A-120.
G33 (= G33) mutation to A: Loss of imine deaminase activity; when associated with A-19; A-59; A-91; A-105; A-114 and A-120.
N59 (= N60) mutation to A: Loss of imine deaminase activity; when associated with A-19; A-33; A-91; A-105; A-114 and A-120.
N91 (= N92) mutation to A: Loss of imine deaminase activity; when associated with A-19; A-33; A-59; A-105; A-114 and A-120.
R105 (= R107) mutation to A: Loss of imine deaminase activity; when associated with A-19; A-33; A-59; A-91; A-114 and A-120.
P114 (= P116) mutation to A: Loss of imine deaminase activity; when associated with A-19; A-33; A-59; A-91; A-105 and A-120.
E120 (= E122) mutation to A: Loss of imine deaminase activity; when associated with A-19; A-33; A-59; A-91; A-105 and A-114.

Sites not aligning to the query:

1 modified: Initiator methionine, Removed

P0AFQ5 3-aminoacrylate deaminase RutC; 3-AA deaminase; EC 3.5.-.- from Escherichia coli (strain K12) (see paper)
34% identity, 98% coverage: 1:127/130 of query aligns to 1:124/128 of P0AFQ5

query
sites
P0AFQ5

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R104 (= R107) mutation to A: Loss of activity.

Q12429 Diphthine--ammonia ligase; Diphthamide synthase; Diphthamide synthetase; EC 6.3.1.14 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 2 papers)
25% identity, 61% coverage: 48:126/130 of query aligns to 333:415/685 of Q12429

query
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Q12429

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Sites not aligning to the query:

216 G→N: Completely inactivates the enzyme.
220 mutation E->A,H: Completely inactivates the enzyme. Resistance to sordarin.

Query Sequence

>Synpcc7942_0972 FitnessBrowser__SynE:Synpcc7942_0972
MTREVFYTDQAPAPVGPYSQAIAASGRMLFVSGQIALDPATGTMVGGDDVEVQTHQVLSN
LKAVLAAAGASFGDVVRTTVFLADMEDFARVNAIYATVFDEATAPARACVQAARLPKDAK
VEIDCIAVLP

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory