Comparing Synpcc7942_1403 FitnessBrowser__SynE:Synpcc7942_1403 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
2q42A Ensemble refinement of the protein crystal structure of glyoxalase ii from arabidopsis thaliana gene at2g31350 (see paper)
47% identity, 100% coverage: 1:258/258 of query aligns to 1:254/254 of 2q42A
Q9SID3 Hydroxyacylglutathione hydrolase 2, mitochondrial; Glyoxalase II; Glx II; EC 3.1.2.6 from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
47% identity, 100% coverage: 1:258/258 of query aligns to 71:324/324 of Q9SID3
8ewoA Crystal structure of putative glyoxylase ii from pseudomonas aeruginosa
48% identity, 100% coverage: 1:258/258 of query aligns to 3:259/259 of 8ewoA
O24496 Hydroxyacylglutathione hydrolase cytoplasmic; Glyoxalase II; Glx II; EC 3.1.2.6 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
44% identity, 100% coverage: 1:258/258 of query aligns to 1:256/258 of O24496
2qedA Crystal structure of salmonella thyphimurium lt2 glyoxalase ii (see paper)
44% identity, 100% coverage: 1:258/258 of query aligns to 2:252/252 of 2qedA
Q8ZRM2 Hydroxyacylglutathione hydrolase; Glyoxalase II; Glx II; EC 3.1.2.6 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
44% identity, 100% coverage: 1:258/258 of query aligns to 1:251/251 of Q8ZRM2
1qh5B Human glyoxalase ii with s-(n-hydroxy-n-bromophenylcarbamoyl) glutathione (see paper)
40% identity, 100% coverage: 1:258/258 of query aligns to 1:255/260 of 1qh5B
1qh5A Human glyoxalase ii with s-(n-hydroxy-n-bromophenylcarbamoyl) glutathione (see paper)
40% identity, 100% coverage: 1:258/258 of query aligns to 1:255/260 of 1qh5A
1qh3A Human glyoxalase ii with cacodylate and acetate ions present in the active site (see paper)
40% identity, 100% coverage: 1:258/258 of query aligns to 1:255/260 of 1qh3A
Q16775 Hydroxyacylglutathione hydrolase, mitochondrial; Glyoxalase II; Glx II; EC 3.1.2.6 from Homo sapiens (Human) (see paper)
40% identity, 100% coverage: 1:258/258 of query aligns to 49:303/308 of Q16775
6rz0A Crystal structure of escherichia coli glyoxalase ii
42% identity, 100% coverage: 1:258/258 of query aligns to 1:251/251 of 6rz0A
2p18A Crystal structure of the leishmania infantum glyoxalase ii (see paper)
32% identity, 93% coverage: 1:240/258 of query aligns to 13:269/283 of 2p18A
Q9C8L4 Persulfide dioxygenase ETHE1 homolog, mitochondrial; Glyoxalase II; Glx II; Sulfur dioxygenase ETHE1; EC 1.13.11.18 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
35% identity, 65% coverage: 12:178/258 of query aligns to 64:234/294 of Q9C8L4
2gcuA X-ray structure of gene product from arabidopsis thaliana at1g53580 (see paper)
35% identity, 65% coverage: 12:178/258 of query aligns to 15:185/244 of 2gcuA
4ysbA Crystal structure of ethe1 from myxococcus xanthus (see paper)
32% identity, 64% coverage: 13:178/258 of query aligns to 14:172/225 of 4ysbA
2xf4A Crystal structure of salmonella enterica serovar typhimurium ycbl (see paper)
32% identity, 62% coverage: 17:176/258 of query aligns to 17:192/210 of 2xf4A
2zwrB Crystal structure of ttha1623 from thermus thermophilus hb8 (see paper)
35% identity, 61% coverage: 20:176/258 of query aligns to 18:184/207 of 2zwrB
2zziA Crystal structure of ttha1623 in a di-iron-bound form (see paper)
35% identity, 61% coverage: 20:176/258 of query aligns to 16:182/198 of 2zziA
O95571 Persulfide dioxygenase ETHE1, mitochondrial; Ethylmalonic encephalopathy protein 1; Hepatoma subtracted clone one protein; Sulfur dioxygenase ETHE1; EC 1.13.11.18 from Homo sapiens (Human) (see 4 papers)
32% identity, 65% coverage: 12:178/258 of query aligns to 35:197/254 of O95571
Sites not aligning to the query:
4chlB Human ethylmalonic encephalopathy protein 1 (hethe1) (see paper)
32% identity, 65% coverage: 12:178/258 of query aligns to 19:181/237 of 4chlB
>Synpcc7942_1403 FitnessBrowser__SynE:Synpcc7942_1403
MRIDCLPALQDNYIFLLVDVEQRQAAVVDPAEAEPVLAALQAEGLTLTAILNTHHHGDHV
GGNRRLLRQFPEAAVSASAVDRDRIPGQTVLLEAGDRLQICGQTAEVLFVPGHTRGHIAY
YFPEVAEGNPRGALFCGDTLFAGGCGRLFEGTPAQMLDSLQQLRSLPDDTAIYCAHEYTL
NNLRFALTVEPDNFDLQQRYQAVAIARQQGQATIPSRLDIEKATNPFLRWDQAALQAAVS
SQDPVQTLARLRSRKDQF
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory