SitesBLAST

Comparing Synpcc7942_1717 FitnessBrowser__SynE:Synpcc7942_1717 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found no hits to proteins with known functional sites (download)

Query Sequence

>Synpcc7942_1717 FitnessBrowser__SynE:Synpcc7942_1717
VAETEIPIPAATPSLTDACVHCGFCLSDCPSYRVLGRETDSPRGRVYLMDSLQQGRIELS
DTVVEHFDTCLGCLACTSACPSGVQYDQLIEEMRQRIAQEHRRPWPEAIWRKLLFAFLPY
PERLRPILRLGQLYQSSGLQNWLNRQPLLQKFPQLAAASALLPPLSPASFQDNWPTLLPA
LGDRRYRVGLLLGCVQRLFNPEVNAAAIRVLRANGCDVVIPPQQGCCGAVAHHQGEMQQA
QDLARAVIRSFEAENLDAILVTASGCGHTLKHYGAILADDPEWCDRAQQLADRVQDVQEF
LATVGLTTPLHPLQEQPLVVVYQDACHMLHGQKIRNQPRQLLQQIPGIELREPVDAQLCC
GSAGIYNLLQPAIAAELGQQKARSLAETGAQMIASANIGCYVQIRHHLQAQSKDLPVLHP
LQIIDRAMNFQNH

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SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.