Comparing Synpcc7942_2420 FitnessBrowser__SynE:Synpcc7942_2420 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
4hzdA Crystal structure of serine acetyltransferase in complex with coenzyme a from brucella abortus strain s19 (see paper)
49% identity, 69% coverage: 5:172/244 of query aligns to 81:248/250 of 4hzdA
6wyeA Crystal structure of neisseria gonorrhoeae serine acetyltransferase (cyse) (see paper)
47% identity, 70% coverage: 1:171/244 of query aligns to 78:248/261 of 6wyeA
7ra4A Crystal structure of neisseria gonorrhoeae serine acetyltransferase (cyse) in complex with serine (see paper)
47% identity, 68% coverage: 1:166/244 of query aligns to 76:241/243 of 7ra4A
4n69A Soybean serine acetyltransferase complexed with serine (see paper)
52% identity, 66% coverage: 7:168/244 of query aligns to 82:243/243 of 4n69A
8i04A Crystal structure of serine acetyltransferase from salmonella typhimurium complexed with serine (see paper)
42% identity, 75% coverage: 1:182/244 of query aligns to 73:254/258 of 8i04A
4h7oA Crystal structure of serine acetyltransferase from vibrio cholerae o1 biovar el tor n16961
45% identity, 75% coverage: 1:182/244 of query aligns to 73:254/258 of 4h7oA
Sites not aligning to the query:
3gvdI Crystal structure of serine acetyltransferase cyse from yersinia pestis
45% identity, 73% coverage: 4:182/244 of query aligns to 83:261/272 of 3gvdI
8i09A Crystal structure of serine acetyltransferase from salmonella typhimurium complexed with butyl gallate (see paper)
44% identity, 69% coverage: 1:168/244 of query aligns to 76:243/246 of 8i09A
8i06A Crystal structure of serine acetyltransferase from salmonella typhimurium complexed with coa (see paper)
44% identity, 69% coverage: 1:168/244 of query aligns to 77:244/244 of 8i06A
1t3dA Crystal structure of serine acetyltransferase from e.Coli at 2.2a (see paper)
41% identity, 75% coverage: 1:182/244 of query aligns to 77:258/262 of 1t3dA
1ssqD Serine acetyltransferase- complex with cysteine (see paper)
41% identity, 73% coverage: 6:182/244 of query aligns to 78:254/257 of 1ssqD
3q1xA Crystal structure of entamoeba histolytica serine acetyltransferase 1 in complex with l-serine (see paper)
47% identity, 65% coverage: 3:160/244 of query aligns to 101:266/267 of 3q1xA
3p47A Crystal structure of entamoeba histolytica serine acetyltransferase 1 in complex with l-cysteine (see paper)
47% identity, 65% coverage: 3:160/244 of query aligns to 103:268/270 of 3p47A
4n6bA Soybean serine acetyltransferase complexed with coa (see paper)
50% identity, 66% coverage: 7:168/244 of query aligns to 78:233/233 of 4n6bA
7bw9A Crystal structure of serine acetyltransferase isoform 3 in complex with cysteine from entamoeba histolytica
48% identity, 59% coverage: 16:160/244 of query aligns to 114:258/280 of 7bw9A
1sstA Serine acetyltransferase- complex with coa (see paper)
40% identity, 67% coverage: 6:168/244 of query aligns to 78:233/233 of 1sstA
P07464 Galactoside O-acetyltransferase; GAT; Acetyl-CoA:galactoside 6-O-acetyltransferase; Thiogalactoside acetyltransferase; Thiogalactoside transacetylase; EC 2.3.1.18 from Escherichia coli (strain K12) (see 3 papers)
32% identity, 43% coverage: 65:168/244 of query aligns to 73:182/203 of P07464
Sites not aligning to the query:
1krvA Galactoside acetyltransferase in complex with coa and pnp-beta-gal (see paper)
32% identity, 43% coverage: 65:168/244 of query aligns to 72:181/201 of 1krvA
Sites not aligning to the query:
1kruA Galactoside acetyltransferase in complex with iptg and coenzyme a (see paper)
32% identity, 43% coverage: 65:168/244 of query aligns to 72:181/201 of 1kruA
Sites not aligning to the query:
1krrA Galactoside acetyltransferase in complex with acetyl-coenzyme a (see paper)
32% identity, 43% coverage: 65:168/244 of query aligns to 72:181/200 of 1krrA
Sites not aligning to the query:
>Synpcc7942_2420 FitnessBrowser__SynE:Synpcc7942_2420
VFKTLAADFRIIFERDPAARNGLEVLLCYPGFQALVCHRVAHWLYQQRLPVIPRLLSHLS
RLLTGVEIHPGARLGQGIFIDHGMGVVIGETAIVGDYCLIYQGVTLGGTGKQSGKRHPTL
ANNVVVGAGAKVLGNIQIGENVRIGAGSVVLRDVPSDCTVVGIPGRVIYRSGVRVDPLDH
SQMPDSEARVIRMLLDRIEALEDQLEGLNLPPAEEAIDVTLAPVGDRCQLRDRTIEEFLD
GAGI
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory