Comparing WP_002719401.1 NCBI__GCF_000015985.1:WP_002719401.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 4 hits to proteins with known functional sites (download)
6j2lA Crystal structure of bi-functional enzyme (see paper)
45% identity, 64% coverage: 3:68/103 of query aligns to 113:178/200 of 6j2lA
Sites not aligning to the query:
7bgnA Crystal structure of mthisn2-amp complex, a bifunctional enzyme from the histidine biosynthetic pathway (see paper)
43% identity, 87% coverage: 1:90/103 of query aligns to 115:203/204 of 7bgnA
Sites not aligning to the query:
7bgmA Crystal structure of mthisn2, a bifunctional enzyme from the histidine biosynthetic pathway (see paper)
42% identity, 87% coverage: 1:90/103 of query aligns to 125:212/213 of 7bgmA
Sites not aligning to the query:
6j2lB Crystal structure of bi-functional enzyme (see paper)
45% identity, 43% coverage: 25:68/103 of query aligns to 120:163/185 of 6j2lB
Sites not aligning to the query:
>WP_002719401.1 NCBI__GCF_000015985.1:WP_002719401.1
MTVLERLAATVEARKGADPDSSWTAKLLAKGPEKCAEKFGEEAVEAIIEAVRGDRARLAS
EAADVLYHLLVMLAARDVTLAEVMAVLEAREGTSGIAEKAGRG
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory