SitesBLAST
Comparing WP_003941279.1 NCBI__GCF_002893965.1:WP_003941279.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
6ie0B X-ray crystal structure of 2r,3r-butanediol dehydrogenase from bacillus subtilis
49% identity, 100% coverage: 1:350/351 of query aligns to 2:345/347 of 6ie0B
1e3jA Ketose reductase (sorbitol dehydrogenase) from silverleaf whitefly (see paper)
31% identity, 99% coverage: 3:349/351 of query aligns to 4:344/348 of 1e3jA
- active site: C38 (= C37), G39 (= G38), S40 (≠ T39), H43 (= H42), H63 (= H71), E64 (= E72), C93 (= C101), C96 (= C104), C99 (= C107), C107 (= C115), T111 (≠ G119), P150 (= P157), G154 (≠ A161), K341 (= K346)
- binding phosphate ion: A174 (= A181), A196 (≠ E203), R197 (≠ L204), S198 (= S205), R201 (= R208)
- binding zinc ion: C38 (= C37), H63 (= H71), E64 (= E72), C93 (= C101), C96 (= C104), C99 (= C107), C107 (= C115)
1pl6A Human sdh/nadh/inhibitor complex (see paper)
33% identity, 94% coverage: 7:337/351 of query aligns to 14:337/356 of 1pl6A
- active site: C44 (= C37), G45 (= G38), S46 (≠ T39), H49 (= H42), H69 (= H71), E70 (= E72), R99 (≠ C101), D102 (≠ C104), C105 (= C107), S113 (≠ C115), F117 (≠ G119), P156 (= P157), G160 (≠ A161)
- binding 4-[2-(hydroxymethyl)pyrimidin-4-yl]-n,n-dimethylpiperazine-1-sulfonamide: C44 (= C37), S46 (≠ T39), I56 (= I49), F59 (= F50), H69 (= H71), E155 (= E156), L274 (≠ I273), F297 (≠ I296)
- binding nicotinamide-adenine-dinucleotide: G181 (= G182), P182 (= P183), I183 (= I184), D203 (≠ E203), L204 (= L204), R208 (= R208), C249 (= C248), T250 (≠ A249), V272 (= V271), G273 (≠ S272), L274 (≠ I273), F297 (≠ I296), R298 (≠ A297)
- binding zinc ion: C44 (= C37), H69 (= H71)
Sites not aligning to the query:
Q00796 Sorbitol dehydrogenase; SDH; (R,R)-butanediol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Ribitol dehydrogenase; RDH; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.4; EC 1.1.1.14; EC 1.1.1.56; EC 1.1.1.9 from Homo sapiens (Human) (see 10 papers)
33% identity, 94% coverage: 7:337/351 of query aligns to 15:338/357 of Q00796
- C45 (= C37) binding Zn(2+)
- H70 (= H71) binding Zn(2+)
- E71 (= E72) binding Zn(2+)
- R110 (≠ N111) to P: in HMNR8; results in protein aggregation
- H135 (≠ V136) to R: in HMNR8; results in protein aggregation
- A153 (= A153) to D: in HMNR8; uncertain significance; results in protein aggregation; dbSNP:rs145813597
- I184 (= I184) binding NAD(+)
- D204 (≠ E203) binding NAD(+)
- R209 (= R208) binding NAD(+)
- Q239 (≠ S237) to L: in dbSNP:rs1042079
- N269 (≠ V267) to T: in dbSNP:rs930337
- VGL 273:275 (≠ VSI 271:273) binding NAD(+)
- VFR 297:299 (≠ TIA 295:297) binding NAD(+)
- V322 (≠ I320) to I: in HMNR8; uncertain significance; dbSNP:rs149975952
Sites not aligning to the query:
- 1 modified: Initiator methionine, Removed
Q7SI09 L-arabinitol 4-dehydrogenase; LAD; EC 1.1.1.12 from Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (see 2 papers)
31% identity, 94% coverage: 21:351/351 of query aligns to 37:361/363 of Q7SI09
- C53 (= C37) binding Zn(2+)
- F59 (≠ E43) mutation F->A,S,Y: No effect.
- H78 (= H71) binding Zn(2+)
- E79 (= E72) binding Zn(2+)
- C108 (= C101) binding Zn(2+)
- C111 (= C104) binding Zn(2+)
- C114 (= C107) binding Zn(2+)
- C122 (= C115) binding Zn(2+)
- E163 (= E156) binding Zn(2+)
- PI 190:191 (= PI 183:184) binding NAD(+)
- D211 (≠ E203) binding NAD(+)
- DI 211:212 (≠ EL 203:204) mutation to SR: Alters cofactor specificity from NAD to NADP; when associated with T-348.
- R216 (= R208) binding NAD(+)
- I282 (≠ V271) binding NAD(+)
- QYR 306:308 (≠ TIA 295:297) binding NAD(+)
- S348 (≠ I338) mutation to T: Alters cofactor specificity from NAD to NADP; when associated with 211-SR-212.
3m6iA L-arabinitol 4-dehydrogenase (see paper)
31% identity, 94% coverage: 21:351/351 of query aligns to 33:357/358 of 3m6iA
- active site: C49 (= C37), G50 (= G38), S51 (≠ T39), H54 (= H42), H74 (= H71), E75 (= E72), C104 (= C101), C107 (= C104), C110 (= C107), C118 (= C115), D122 (≠ G119), P160 (= P157), A164 (= A161), K352 (= K346)
- binding nicotinamide-adenine-dinucleotide: C49 (= C37), V163 (= V160), G185 (= G182), P186 (= P183), I187 (= I184), D207 (≠ E203), R212 (= R208), C255 (= C248), T256 (≠ A249), I278 (≠ V271), G279 (≠ S272), V280 (≠ I273), R304 (≠ A297)
- binding zinc ion: C49 (= C37), H74 (= H71), C104 (= C101), C107 (= C104), C110 (= C107), C118 (= C115)
Q96V44 L-arabinitol 4-dehydrogenase; LAD; EC 1.1.1.12 from Hypocrea jecorina (Trichoderma reesei) (see paper)
30% identity, 94% coverage: 21:351/351 of query aligns to 50:375/377 of Q96V44
- DI 224:225 (≠ EL 203:204) mutation to SR: Alters cofactor specificity from NAD to NADP; when associated with T-362.
- A362 (≠ I338) mutation to T: Alters cofactor specificity from NAD to NADP; when associated with 224-SR-225.
B6HI95 L-arabinitol 4-dehydrogenase; LAD; EC 1.1.1.12 from Penicillium rubens (strain ATCC 28089 / DSM 1075 / NRRL 1951 / Wisconsin 54-1255) (Penicillium chrysogenum) (see paper)
31% identity, 94% coverage: 22:351/351 of query aligns to 39:371/385 of B6HI95
- DI 212:213 (≠ EL 203:204) mutation to SR: Alters cofactor specificity from NAD to NADP; when associated with T-358.
- S358 (≠ I338) mutation to T: Alters cofactor specificity from NAD to NADP; when associated with 212-SR-213.
2dfvA Hyperthermophilic threonine dehydrogenase from pyrococcus horikoshii (see paper)
34% identity, 96% coverage: 1:337/351 of query aligns to 7:333/346 of 2dfvA
- active site: C40 (= C37), G41 (= G38), T42 (= T39), H45 (= H42), H65 (= H71), E66 (= E72), C95 (= C101), C98 (= C104), C101 (= C107), C109 (= C115), K113 (≠ G119), P151 (= P157), A155 (= A161)
- binding nicotinamide-adenine-dinucleotide: G175 (= G182), P176 (= P183), L177 (≠ I184), E197 (= E203), P198 (≠ L204), R202 (= R208), F241 (≠ C248), S242 (≠ A249), A244 (≠ V251), L264 (≠ V271), G265 (≠ S272), L266 (≠ I273), I289 (≠ T295), T290 (≠ I296)
- binding zinc ion: C95 (= C101), C101 (= C107), C109 (= C115)
Sites not aligning to the query:
O58389 L-threonine 3-dehydrogenase; L-ThrDH; TDH; L-threonine dehydrogenase; EC 1.1.1.103 from Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) (see 2 papers)
34% identity, 96% coverage: 1:337/351 of query aligns to 9:335/348 of O58389
- C42 (= C37) binding Zn(2+)
- T44 (= T39) mutation to A: Total loss of enzymatic activity.
- H67 (= H71) binding Zn(2+)
- E68 (= E72) binding Zn(2+)
- C97 (= C101) binding Zn(2+)
- C100 (= C104) binding Zn(2+)
- C103 (= C107) binding Zn(2+)
- C111 (= C115) binding Zn(2+)
- E152 (= E156) mutation E->A,Q: Almost complete loss of enzymatic activity.; mutation to C: 120-fold decrease in catalytic efficiency.; mutation to D: Shows 3-fold higher turnover rate and reduced affinities toward L-threonine and NAD(+), compared to wild-type.; mutation to K: Total loss of enzymatic activity.
- L179 (≠ I184) binding NAD(+)
- E199 (= E203) binding NAD(+); mutation to A: Large decrease in affinity for NAD(+).
- R204 (= R208) binding NAD(+); mutation to A: Large decrease in affinity for NAD(+).
- LGL 266:268 (≠ VSI 271:273) binding NAD(+)
- IT 291:292 (≠ TI 295:296) binding NAD(+)
- R294 (vs. gap) mutation to A: 4000-fold decrease in catalytic efficiency.
3qe3A Sheep liver sorbitol dehydrogenase (see paper)
31% identity, 94% coverage: 7:336/351 of query aligns to 9:331/351 of 3qe3A
- active site: C39 (= C37), G40 (= G38), S41 (≠ T39), H44 (= H42), H64 (= H71), E65 (= E72), R94 (≠ C101), D97 (≠ C104), C100 (= C107), S108 (≠ C115), F112 (≠ G119), P151 (= P157), G155 (≠ A161)
- binding glycerol: Y45 (≠ E43), F54 (= F50), T116 (≠ L123), R293 (≠ A297)
- binding zinc ion: C39 (= C37), H64 (= H71), E65 (= E72)
Sites not aligning to the query:
A2QAC0 L-arabinitol 4-dehydrogenase; LAD; EC 1.1.1.12 from Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) (see 2 papers)
31% identity, 96% coverage: 14:351/351 of query aligns to 31:372/386 of A2QAC0
- M70 (≠ H58) mutation to F: Abolishes enzyme activity.
- DI 213:214 (≠ EL 203:204) mutation to SR: Alters cofactor specificity from NAD to NADP; when associated with T-359.
- Y318 (≠ I296) mutation to F: Increases affinity for D-sorbitol.
- A359 (≠ I338) mutation to T: Alters cofactor specificity from NAD to NADP; when associated with 213-SR-214.
P07846 Sorbitol dehydrogenase; SDH; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Ovis aries (Sheep) (see paper)
32% identity, 94% coverage: 7:336/351 of query aligns to 13:334/354 of P07846