SitesBLAST
Comparing WP_003942257.1 NCBI__GCF_002893965.1:WP_003942257.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
8wxkA Crystal structure of udp-glucose 4-epimerase (all4713) with udp- glucose and NAD from nostoc sp. Pcc 7120
50% identity, 96% coverage: 3:319/329 of query aligns to 8:328/332 of 8wxkA
- binding nicotinamide-adenine-dinucleotide: G12 (= G7), G15 (= G10), Y16 (= Y11), I17 (≠ V12), D36 (= D31), N37 (≠ D32), V39 (≠ S34), Y40 (≠ T35), G41 (= G36), D58 (= D51), T59 (≠ V52), F80 (= F74), S81 (≠ A75), A82 (= A76), N99 (≠ G93), S122 (= S116), T124 (= T118), Y148 (= Y142), K152 (= K146), Y175 (= Y169), A178 (≠ V172), H191 (≠ R183)
- binding uridine-5'-diphosphate-glucose: T124 (= T118), C125 (≠ A119), Y148 (= Y142), N177 (= N171), H196 (= H188), L197 (= L189), S213 (= S205), F215 (= F207), C226 (≠ A218), R228 (= R220), V266 (= V257), R289 (= R280), D292 (= D283)
2c20A Crystal structure of udp-glucose 4-epimerase
48% identity, 96% coverage: 3:319/329 of query aligns to 3:321/329 of 2c20A
- active site: T117 (= T118), A118 (= A119), A119 (= A120), Y141 (= Y142), K145 (= K146), H184 (≠ R183)
- binding nicotinamide-adenine-dinucleotide: G7 (= G7), G10 (= G10), Y11 (= Y11), I12 (≠ V12), D31 (= D31), N32 (≠ D32), Q34 (≠ S34), T35 (= T35), G36 (= G36), D51 (= D51), L52 (≠ V52), F73 (= F74), A74 (= A75), A75 (= A76), N92 (≠ G93), Y141 (= Y142), K145 (= K146), Y168 (= Y169), F169 (= F170), V171 (= V172), H184 (≠ R183)
- binding zinc ion: E182 (= E181), H184 (≠ R183), E187 (= E186), H189 (= H188)
4twrA Structure of udp-glucose 4-epimerase from brucella abortus
44% identity, 95% coverage: 2:314/329 of query aligns to 3:316/325 of 4twrA
- active site: S117 (≠ T118), C118 (≠ A119), A119 (= A120), Y141 (= Y142), K145 (= K146), H184 (≠ R183), H189 (= H188)
- binding nicotinamide-adenine-dinucleotide: G8 (= G7), G11 (= G10), F12 (≠ Y11), I13 (≠ V12), D32 (= D31), N33 (≠ D32), L34 (= L33), S35 (= S34), T36 (= T35), G37 (= G36), D51 (= D51), I52 (≠ V52), F73 (= F74), A74 (= A75), A75 (= A76), N92 (≠ G93), S115 (= S116), K145 (= K146), Y168 (= Y169), A171 (≠ V172), H184 (≠ R183)
- binding zinc ion: E182 (= E181), H184 (≠ R183), E187 (= E186), H189 (= H188)
7k3pA The structure of the udp-glc/glcnac 4-epimerase from the human pathogen campylobacter jejuni
41% identity, 95% coverage: 2:315/329 of query aligns to 3:323/329 of 7k3pA
- binding nicotinamide-adenine-dinucleotide: G8 (= G7), G11 (= G10), Y12 (= Y11), I13 (≠ V12), D32 (= D31), N33 (≠ D32), S35 (= S34), G37 (= G36), D57 (= D51), L58 (≠ V52), F79 (= F74), A80 (= A75), I83 (≠ S78), N98 (≠ G93), Y147 (= Y142), K151 (= K146), Y175 (= Y169), N177 (= N171), V178 (= V172)
2udpA Udp-galactose 4-epimerase complexed with udp-phenol (see paper)
41% identity, 96% coverage: 1:317/329 of query aligns to 1:328/338 of 2udpA
- active site: S124 (≠ T118), A125 (= A119), T126 (≠ A120), Y149 (= Y142), K153 (= K146), M189 (vs. gap)
- binding nicotinamide-adenine-dinucleotide: G7 (= G7), G10 (= G10), Y11 (= Y11), I12 (≠ V12), D31 (= D31), N32 (≠ D32), L33 (= L33), C34 (≠ S34), N35 (≠ T35), S36 (≠ G36), D58 (= D51), I59 (≠ V52), F80 (= F74), A81 (= A75), G82 (≠ A76), K84 (≠ S78), S122 (= S116), S124 (≠ T118), Y149 (= Y142), K153 (= K146), Y177 (= Y169)
- binding phenyl-uridine-5'-diphosphate: N179 (= N171), N199 (≠ H188), L200 (= L189), A216 (≠ S205), I217 (≠ V206), F218 (= F207), R231 (= R220), Y233 (= Y222), V269 (= V257), R292 (= R280), D295 (= D283)
1udcA Structure of udp-galactose-4-epimerase complexed with udp-mannose (see paper)
41% identity, 96% coverage: 1:317/329 of query aligns to 1:328/338 of 1udcA
- active site: S124 (≠ T118), A125 (= A119), T126 (≠ A120), Y149 (= Y142), K153 (= K146), M189 (vs. gap)
- binding nicotinamide-adenine-dinucleotide: G7 (= G7), G10 (= G10), Y11 (= Y11), I12 (≠ V12), D31 (= D31), N32 (≠ D32), C34 (≠ S34), N35 (≠ T35), S36 (≠ G36), D58 (= D51), I59 (≠ V52), F80 (= F74), A81 (= A75), G82 (≠ A76), K84 (≠ S78), S122 (= S116), Y149 (= Y142), K153 (= K146), Y177 (= Y169), P180 (≠ V172)
- binding uridine-5'-diphosphate-mannose: T126 (≠ A120), Y149 (= Y142), N179 (= N171), N199 (≠ H188), L200 (= L189), L215 (≠ I204), A216 (≠ S205), I217 (≠ V206), F218 (= F207), R231 (= R220), Y233 (= Y222), V269 (= V257), R292 (= R280)
P09147 UDP-glucose 4-epimerase; Galactowaldenase; UDP-galactose 4-epimerase; EC 5.1.3.2 from Escherichia coli (strain K12) (see 10 papers)
41% identity, 96% coverage: 1:317/329 of query aligns to 1:328/338 of P09147
- YI 11:12 (≠ YV 11:12) binding NAD(+)
- DNLCNS 31:36 (≠ DDLSTG 31:36) binding NAD(+)
- DI 58:59 (≠ DV 51:52) binding NAD(+)
- FAGLK 80:84 (≠ FAAQS 74:78) binding NAD(+)
- N99 (≠ G93) binding NAD(+)
- S124 (≠ T118) binding NAD(+); mutation to A: No major structural changes. Catalytic efficiency is very low and affinity binding is 21% of the wild-type enzyme.; mutation to T: No major structural changes. Catalytic efficiency is about 30% of that of the wild-type enzyme, and affinity binding is similar to that of the native enzyme.
- Y149 (= Y142) active site, Proton acceptor; binding NAD(+); mutation to F: No major structural changes. Catalytic efficiency is very low and affinity binding is 12% of the wild-type enzyme.
- K153 (= K146) binding NAD(+); mutation to A: Decreases the catalytic activity. Not reduced by sugars in the presence or absence of UMP. It contains very little NADH.; mutation to M: Decreases the catalytic activity. Not reduced by sugars in the presence or absence of UMP. It contains very little NADH.
- F178 (= F170) binding NAD(+)
- Y299 (≠ L287) mutation to C: Loss of epimerase activity with UDP-Gal by almost 5-fold, but it results in a gain of epimerase activity with uridine diphosphate N-acetylglucosamine (UDP-GlcNAc) by 230-fold with minimal changes in its three-dimensional structure.
1udaA Structure of udp-galactose-4-epimerase complexed with udp-4-deoxy-4- fluoro-alpha-d-galactose (see paper)
41% identity, 96% coverage: 1:317/329 of query aligns to 1:328/338 of 1udaA
- active site: S124 (≠ T118), A125 (= A119), T126 (≠ A120), Y149 (= Y142), K153 (= K146), M189 (vs. gap)
- binding nicotinamide-adenine-dinucleotide: G7 (= G7), G10 (= G10), Y11 (= Y11), I12 (≠ V12), D31 (= D31), N32 (≠ D32), L33 (= L33), C34 (≠ S34), N35 (≠ T35), S36 (≠ G36), D58 (= D51), I59 (≠ V52), F80 (= F74), A81 (= A75), G82 (≠ A76), K84 (≠ S78), S122 (= S116), Y149 (= Y142), K153 (= K146), Y177 (= Y169), P180 (≠ V172)
- binding uridine-5'-diphosphate-4-deoxy-4-fluoro-alpha-d-galactose: T126 (≠ A120), N179 (= N171), N199 (≠ H188), L200 (= L189), A216 (≠ S205), I217 (≠ V206), F218 (= F207), R231 (= R220), Y233 (= Y222), R292 (= R280), D295 (= D283), Y299 (≠ L287)
1naiA Udp-galactose 4-epimerase from escherichia coli, oxidized (see paper)
41% identity, 96% coverage: 1:317/329 of query aligns to 1:328/338 of 1naiA
- active site: S124 (≠ T118), A125 (= A119), T126 (≠ A120), Y149 (= Y142), K153 (= K146), M189 (vs. gap)
- binding nicotinamide-adenine-dinucleotide: G7 (= G7), G10 (= G10), Y11 (= Y11), I12 (≠ V12), D31 (= D31), N32 (≠ D32), L33 (= L33), C34 (≠ S34), N35 (≠ T35), S36 (≠ G36), D58 (= D51), I59 (≠ V52), F80 (= F74), A81 (= A75), G82 (≠ A76), K84 (≠ S78), Y149 (= Y142), K153 (= K146), Y177 (= Y169), P180 (≠ V172)
- binding 1,3-propandiol: N35 (≠ T35), K84 (≠ S78), E191 (= E181), P193 (vs. gap)
- binding uridine-5'-diphosphate: N179 (= N171), N199 (≠ H188), L200 (= L189), L215 (≠ I204), A216 (≠ S205), R231 (= R220), Y233 (= Y222), R292 (= R280)
1lrjA Crystal structure of e. Coli udp-galactose 4-epimerase complexed with udp-n-acetylglucosamine (see paper)
41% identity, 96% coverage: 1:317/329 of query aligns to 1:328/338 of 1lrjA
- active site: S124 (≠ T118), A125 (= A119), T126 (≠ A120), Y149 (= Y142), K153 (= K146), M189 (vs. gap)
- binding nicotinamide-adenine-dinucleotide: G7 (= G7), G10 (= G10), Y11 (= Y11), I12 (≠ V12), D31 (= D31), N32 (≠ D32), L33 (= L33), C34 (≠ S34), N35 (≠ T35), S36 (≠ G36), D58 (= D51), I59 (≠ V52), F80 (= F74), A81 (= A75), G82 (≠ A76), K84 (≠ S78), Y149 (= Y142), K153 (= K146), Y177 (= Y169), P180 (≠ V172)
- binding uridine-diphosphate-n-acetylglucosamine: V86 (= V80), S124 (≠ T118), F178 (= F170), N179 (= N171), L200 (= L189), L215 (≠ I204), A216 (≠ S205), F218 (= F207), R231 (= R220), Y233 (= Y222), V269 (= V257), R292 (= R280), D295 (= D283)
1kvrA Udp-galactose 4-epimerase complexed with udp-phenol (see paper)
41% identity, 96% coverage: 1:317/329 of query aligns to 1:328/338 of 1kvrA
- active site: A124 (≠ T118), A125 (= A119), T126 (≠ A120), Y149 (= Y142), K153 (= K146), M189 (vs. gap)
- binding nicotinamide-adenine-dinucleotide: G7 (= G7), G10 (= G10), Y11 (= Y11), I12 (≠ V12), D31 (= D31), N32 (≠ D32), C34 (≠ S34), N35 (≠ T35), S36 (≠ G36), D58 (= D51), I59 (≠ V52), F80 (= F74), A81 (= A75), G82 (≠ A76), K84 (≠ S78), S122 (= S116), S123 (= S117), Y149 (= Y142), K153 (= K146), Y177 (= Y169), P180 (≠ V172)
- binding uridine-5'-diphosphate: N179 (= N171), N198 (≠ T187), N199 (≠ H188), L200 (= L189), A216 (≠ S205), I217 (≠ V206), F218 (= F207), R231 (= R220), Y233 (= Y222), V269 (= V257), R292 (= R280), D295 (= D283)
1a9yA Udp-galactose 4-epimerase mutant s124a/y149f complexed with udp- glucose (see paper)
41% identity, 96% coverage: 1:317/329 of query aligns to 1:328/338 of 1a9yA
- active site: A124 (≠ T118), A125 (= A119), T126 (≠ A120), F149 (≠ Y142), K153 (= K146)
- binding nicotinamide-adenine-dinucleotide: G7 (= G7), G10 (= G10), Y11 (= Y11), I12 (≠ V12), D31 (= D31), N32 (≠ D32),