SitesBLAST
Comparing WP_004042371.1 NCBI__GCF_000337315.1:WP_004042371.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 20 (the maximum) hits to proteins with known functional sites (download)
5nofA Anthranilate phosphoribosyltransferase from thermococcus kodakaraensis (see paper)
44% identity, 95% coverage: 5:319/331 of query aligns to 4:311/325 of 5nofA
4yi7A Anthranilate bound at active site of anthranilate phosphoribosyl transferase from acinetobacter (anprt; trpd)
41% identity, 100% coverage: 1:330/331 of query aligns to 4:324/331 of 4yi7A
1kgzB Crystal structure analysis of the anthranilate phosphoribosyltransferase from erwinia carotovora (current name, pectobacterium carotovorum) (see paper)
39% identity, 99% coverage: 2:328/331 of query aligns to 3:327/330 of 1kgzB
- binding manganese (ii) ion: S92 (= S90), D222 (= D222), E223 (= E223), E223 (= E223)
- binding 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose: V79 (≠ C77), G82 (= G80), G83 (= G81), N90 (= N88), I91 (≠ V89), S92 (= S90), T93 (= T91), K108 (= K106), S118 (= S118)
1zxyA Anthranilate phosphoribosyltransferase from sulfolobus solfataricus in complex with prpp and magnesium (see paper)
38% identity, 81% coverage: 1:269/331 of query aligns to 3:270/344 of 1zxyA
- binding magnesium ion: D223 (= D222), E224 (= E223)
- binding 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose: A78 (≠ C77), G79 (= G78), D83 (= D82), T87 (= T86), N89 (= N88), S91 (= S90), T92 (= T91), K106 (= K106), S118 (= S118), D223 (= D222), E224 (= E223)
2gvqD Anthranilate phosphoribosyl-transferase (trpd) from s. Solfataricus in complex with anthranilate (see paper)
38% identity, 81% coverage: 1:269/331 of query aligns to 3:270/345 of 2gvqD
P50384 Anthranilate phosphoribosyltransferase; EC 2.4.2.18 from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (Sulfolobus solfataricus) (see 2 papers)
38% identity, 81% coverage: 1:269/331 of query aligns to 3:270/345 of P50384
- T87 (= T86) binding 5-phospho-alpha-D-ribose 1-diphosphate
- K106 (= K106) mutation to Q: Affinity for phosphoribosylpyrophosphate is similar to that of the wild-type enzyme and catalytic efficiency dedreases only 10-fold.
- H107 (= H107) mutation to A: Limited effect on either affinity for anthranilate and catalytic efficiency. 300-fold decrease of the affinity for anthranilate, whereas catalytic efficiency remains nearly unchanged; when associated with A-178.
- S118 (= S118) binding 5-phospho-alpha-D-ribose 1-diphosphate
- H154 (= H154) mutation to A: Limited effect on either affinity for anthranilate and catalytic efficiency.
- R164 (= R164) mutation to A: Strong decrease of the affinity for anthranilate, although only a moderate 7-fold decrease in catalytic efficiency.
- D223 (= D222) mutation to N: Affinity for phosphoribosylpyrophosphate is similar to that of the wild-type enzyme and catalytic efficiency is unchanged.
- E224 (= E223) mutation to Q: Affinity for phosphoribosylpyrophosphate is similar to that of the wild-type enzyme and catalytic efficiency is unchanged.
1gxbA Anthranilate phosphoribosyltransferase in complex with pyrophosphate and magnesium (see paper)
37% identity, 81% coverage: 1:269/331 of query aligns to 3:266/339 of 1gxbA
3gbrA Anthranilate phosphoribosyl-transferase (trpd) double mutant d83g f149s from s. Solfataricus (see paper)
37% identity, 81% coverage: 1:269/331 of query aligns to 3:267/341 of 3gbrA
- binding manganese (ii) ion: S91 (= S90), D220 (= D222), E221 (= E223), E221 (= E223)
- binding 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose: A78 (≠ C77), G79 (= G78), T80 (= T79), G81 (= G80), N89 (= N88), V90 (= V89), S91 (= S90), T92 (= T91), K106 (= K106), G114 (= G117)
4zokA Methylsulfonyl-containing inhibitor bound in the substrate capture site of mycobacterium tuberculosis anthranilate phosphoribosyltransferase (anprt; trpd)
40% identity, 95% coverage: 7:322/331 of query aligns to 9:330/342 of 4zokA
- active site: V82 (≠ C77)
- binding 4-methyl-2-{[2-methyl-6-(methylsulfonyl)phenyl]amino}benzoic acid: P156 (= P151), R163 (≠ K158), A166 (≠ I161), A167 (≠ G162)
- binding magnesium ion: S95 (= S90), E228 (= E223)
- binding 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose: G86 (= G81), N93 (= N88), S95 (= S90), T96 (= T91), K111 (= K106), A116 (≠ S111), A117 (≠ V112), S119 (= S114), G122 (= G117)
4zofA Lobenzarit-like inhibitor bound in the active site of mycobacterium tuberculosis anthranilate phosphoribosyltransferase (anprt; trpd)
40% identity, 95% coverage: 7:322/331 of query aligns to 9:330/342 of 4zofA
- active site: V82 (≠ C77)
- binding 2-[(2-carboxy-5-nitrophenyl)amino]-3-methylbenzoic acid: G113 (= G108), N114 (= N109), A155 (= A150), H159 (= H154), Y162 (≠ M157), R169 (= R164), G182 (= G177)
- binding magnesium ion: S95 (= S90), D227 (= D222), E228 (= E223), E228 (= E223)
- binding 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose: G83 (= G78), G85 (= G80), G86 (= G81), N93 (= N88), S95 (= S90), T96 (= T91), K111 (= K106), A116 (≠ S111), A117 (≠ V112), S119 (= S114), G122 (= G117)
5c7sA Prpp complexed with two mn2+ in the active site of mycobacterium tuberculosis anthranilate phosphoribosyltransferase (anprt; trpd)
39% identity, 95% coverage: 7:322/331 of query aligns to 10:332/344 of 5c7sA
- active site: V83 (≠ C77)
- binding manganese (ii) ion: G84 (= G78), S96 (= S90), D228 (= D222), E229 (= E223), E229 (= E223)
- binding 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose: V83 (≠ C77), G84 (= G78), G86 (= G80), G87 (= G81), N94 (= N88), S96 (= S90), T97 (= T91), K112 (= K106), N115 (= N109), S120 (= S114)
4n5vA Alternative substrates of mycobacterium tuberculosis anthranilate phosphoribosyl transferase (see paper)
39% identity, 95% coverage: 7:322/331 of query aligns to 11:334/347 of 4n5vA
- active site: V84 (≠ C77)
- binding 2-amino-4-fluorobenzoic acid: V84 (≠ C77), G85 (= G78), H114 (= H107), G115 (= G108), N116 (= N109), A157 (= A150), A157 (= A150), P158 (= P151), H161 (= H154), Y164 (≠ M157), R165 (≠ K158), A168 (≠ I161), R171 (= R164), G184 (= G177)
- binding magnesium ion: S97 (= S90), D229 (= D222), E230 (= E223), E230 (= E223)
- binding 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose: G85 (= G78), G87 (= G80), G88 (= G81), N95 (= N88), S97 (= S90), T98 (= T91), K113 (= K106), A119 (≠ V112), S120 (= S113), S121 (= S114), G124 (= G117)
3r88B Anthranilate phosphoribosyltransferase (trpd) from mycobacterium tuberculosis (complex with inhibitor acs145) (see paper)
39% identity, 95% coverage: 7:322/331 of query aligns to 9:331/344 of 3r88B
- active site: V82 (≠ C77)
- binding 2-amino-4,5-dimethoxybenzoic acid: N114 (= N109), A155 (= A150), P156 (= P151), H159 (= H154), Y162 (≠ M157), R163 (≠ K158), A166 (≠ I161)
- binding magnesium ion: S95 (= S90), D227 (= D222), E228 (= E223), E228 (= E223)
- binding 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose: V82 (≠ C77), G83 (= G78), G85 (= G80), G86 (= G81), N93 (= N88), S95 (= S90), T96 (= T91), K111 (= K106), N114 (= N109), A117 (≠ V112), S118 (= S113), S119 (= S114)
5c1rA Stereoisomer of prpp bound in the active site of mycobacterium tuberculosis anthranilate phosphoribosyl (anprt; trpd)
39% identity, 95% coverage: 7:322/331 of query aligns to 9:331/343 of 5c1rA
- active site: V82 (≠ C77)
- binding 5-O-[(R)-hydroxy(phosphonooxy)phosphoryl]-1-O-phosphono-alpha-D-ribofuranose: V82 (≠ C77), G83 (= G78), G86 (= G81), N93 (= N88), S95 (= S90), T96 (= T91), K111 (= K106), R115 (≠ Y110), A117 (≠ V112), S118 (= S113), S119 (= S114)
- binding magnesium ion: D87 (= D82), V89 (≠ Y84), S95 (= S90), E228 (= E223)
4n93A Alternative substrates of mycobacterium tuberculosis anthranilate phosphoribosyl transferase (see paper)
39% identity, 95% coverage: 7:322/331 of query aligns to 10:333/346 of 4n93A
- active site: V83 (≠ C77)
- binding 2-amino-6-methylbenzoic acid: V83 (≠ C77), G84 (= G78), T85 (= T79), H113 (= H107), N115 (= N109), N115 (= N109), A156 (= A150), P157 (= P151), H160 (= H154), Y163 (≠ M157), A167 (≠ I161), R170 (= R164), G183 (= G177), P184 (= P178)
- binding magnesium ion: S96 (= S90), D228 (= D222), E229 (= E223), E229 (= E223)
- binding 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose: G84 (= G78), G86 (= G80), G87 (= G81), N94 (= N88), S96 (= S90), T97 (= T91), K112 (= K106), A117 (≠ S111), A118 (≠ V112), S120 (= S114), G123 (= G117)
P9WFX5 Anthranilate phosphoribosyltransferase; EC 2.4.2.18 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see 2 papers)
39% identity, 95% coverage: 7:322/331 of query aligns to 33:357/370 of P9WFX5
- G107 (= G78) binding 5-phospho-alpha-D-ribose 1-diphosphate
- T115 (= T86) binding 5-phospho-alpha-D-ribose 1-diphosphate
- G147 (≠ S118) binding 5-phospho-alpha-D-ribose 1-diphosphate
4owoA Anthranilate phosphoribosyl transferase from mycobacterium tuberculosis in complex with 6-fluoroanthranilate, prpp and magnesium (see paper)
39% identity, 95% coverage: 7:322/331 of query aligns to 11:335/348 of 4owoA
- active site: V84 (≠ C77)
- binding 2-azanyl-6-fluoranyl-benzoic acid: V84 (≠ C77), G85 (= G78), T86 (= T79), H114 (= H107), N116 (= N109), N116 (= N109), A157 (= A150), P158 (= P151), H161 (= H154), Y164 (≠ M157), A168 (≠ I161), R171 (= R164), G184 (= G177)
- binding magnesium ion: S97 (= S90), D229 (= D222), E230 (= E223), E230 (= E223)
- binding 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose: V84 (≠ C77), G85 (= G78), G87 (= G80), G88 (= G81), N95 (= N88), S97 (= S90), T98 (= T91), K113 (= K106), A118 (≠ S111), A119 (≠ V112), S120 (= S113), S121 (= S114), G124 (= G117)
5c2lA Magnesium soaked into the active site of mycobacterium tuberculosis anthranilate phosphoribosyltransferase (anprt; trpd)
39% identity, 95% coverage: 7:322/331 of query aligns to 11:335/349 of 5c2lA
4zojA Methylsulfanyl-containing inhibitor bound in the active site of mycobacterium tuberculosis anthranilate phosphoribosyltransferase (anprt; trpd)
39% identity, 95% coverage: 7:322/331 of query aligns to 9:329/341 of 4zojA
- active site: V82 (≠ C77)
- binding 4-methyl-2-{[2-methyl-6-(methylsulfanyl)phenyl]amino}benzoic acid: N114 (= N109), A155 (= A150), P156 (= P151), H159 (= H154), Y162 (≠ M157), R169 (= R164), G182 (= G177)
- binding magnesium ion: S95 (= S90), D227 (= D222), E228 (= E223), E228 (= E223)
- binding 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose: G83 (= G78), G85 (= G80), G86 (= G81), N93 (= N88), S95 (= S90), T96 (= T91), K111 (= K106), R115 (≠ Y110), A116 (≠ S111), A117 (≠ V112), S119 (= S114)
4owuA Anthranilate phosphoribosyl transferase from mycobacterium tuberculosis in complex with 5-methylanthranilate, prpp and magnesium (see paper)
39% identity, 95% coverage: 7:322/331 of query aligns to 10:334/347 of 4owuA
- active site: V83 (≠ C77)
- binding 2-azanyl-5-methyl-benzoic acid: N115 (= N109), P157 (= P151), Y163 (≠ M157), R164 (≠ K158), A167 (≠ I161)
- binding magnesium ion: S96 (= S90), D228 (= D222), E229 (= E223), E229 (= E223)
- binding 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose: G84 (= G78), G86 (= G80), G87 (= G81), N94 (= N88), S96 (= S90), T97 (= T91), K112 (= K106), A118 (≠ V112), S120 (= S114), G123 (= G117)
Query Sequence
>WP_004042371.1 NCBI__GCF_000337315.1:WP_004042371.1
MQDYIERVTGGADLTVEEARDAARAVFEDATEAQIGALLAALRAKGETEAEIAGFAQGMR
DAALTIEPDRGPLVDTCGTGGDDYNTINVSTTSALVAAGAGAAVAKHGNYSVSSSSGSAD
VLEVAGVNVEAEPESVEACIEDNGVGFMLAPVFHPAMKAVIGPRKELGMRTVFNVLGPLT
NPAGADAQVLGVYDADLVPVIAESLSHMPVERALVVHGSGMDEIALHDATTVAEIDGDEI
TEYTLTPADLGLERAPIEAVAGGTPQENADDLEGILTGDVTGPKRDLILANAGAAIYVAG
LADSLEGGVEVARDAIDSGAAKAKHDALREA
Or try a new SitesBLAST search
SitesBLAST's Database
SitesBLAST's database includes
(1) SwissProt
entries with experimentally-supported functional features;
and (2) protein structures with bound ligands, from the
BioLip database.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory