Comparing WP_004042487.1 NCBI__GCF_000337315.1:WP_004042487.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
1zq1A Structure of gatde tRNA-dependent amidotransferase from pyrococcus abyssi (see paper)
45% identity, 98% coverage: 1:408/415 of query aligns to 11:427/437 of 1zq1A
4q0mA Crystal structure of pyrococcus furiosus l-asparaginase (see paper)
34% identity, 79% coverage: 80:407/415 of query aligns to 4:325/327 of 4q0mA
Q8TZE8 L-asparaginase; EC 3.5.1.1 from Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) (see 2 papers)
34% identity, 79% coverage: 80:407/415 of query aligns to 3:324/326 of Q8TZE8
5ot0A The thermostable l-asparaginase from thermococcus kodakarensis (see paper)
32% identity, 79% coverage: 82:408/415 of query aligns to 5:326/328 of 5ot0A
2wltA The crystal structure of helicobacter pylori l-asparaginase at 1.4 a resolution (see paper)
30% identity, 77% coverage: 77:394/415 of query aligns to 1:315/326 of 2wltA
P0A962 L-asparaginase 1; L-asparaginase I; L-ASNase I; L-asparagine amidohydrolase I; EC 3.5.1.1 from Escherichia coli (strain K12) (see paper)
30% identity, 67% coverage: 132:408/415 of query aligns to 60:335/338 of P0A962
Sites not aligning to the query:
6nxcB Ecai(t162a) mutant in complex with citrate at ph 4 (see paper)
30% identity, 67% coverage: 132:408/415 of query aligns to 59:334/336 of 6nxcB
Sites not aligning to the query:
2himA Crystal structure and allosteric regulation of the cytoplasmic escherichia coli l-asparaginase i (see paper)
29% identity, 67% coverage: 132:408/415 of query aligns to 53:323/324 of 2himA
Sites not aligning to the query:
7r5qA Escherichia coli type ii asparaginase n24s mutant in complex with glu (see paper)
28% identity, 77% coverage: 77:395/415 of query aligns to 1:296/306 of 7r5qA
1jazA Crystal structure of monoclinic form of d90e mutant of escherichia coli asparaginase ii (see paper)
28% identity, 77% coverage: 77:395/415 of query aligns to 1:297/307 of 1jazA
7u6mC Albumin binding domain fused to a mutant of the erwinia asparaginase (see paper)
28% identity, 78% coverage: 72:395/415 of query aligns to 14:332/342 of 7u6mC
P06608 L-asparaginase; L-ASNase; L-asparagine amidohydrolase; EC 3.5.1.1 from Dickeya chrysanthemi (Pectobacterium chrysanthemi) (Erwinia chrysanthemi) (see 2 papers)
28% identity, 77% coverage: 75:395/415 of query aligns to 23:338/348 of P06608
5k45A Wolinella succinogenes l-asparaginase p121 + l-glutamic acid (see paper)
29% identity, 76% coverage: 78:394/415 of query aligns to 2:317/328 of 5k45A
5k3oA Wolinella succinogenes l-asparaginase p121 and l-aspartic acid (see paper)
29% identity, 76% coverage: 78:394/415 of query aligns to 2:317/328 of 5k3oA
1hg0A X-ray structure of the complex between erwinia chrysanthemi l- asparaginase and succinic acid (see paper)
28% identity, 77% coverage: 75:395/415 of query aligns to 2:317/327 of 1hg0A
4r8lA Crystal structure of the asp-bound guinea pig l-asparaginase 1 catalytic domain (see paper)
27% identity, 79% coverage: 80:408/415 of query aligns to 4:352/354 of 4r8lA
1jsrA Crystal structure of erwinia chrysanthemi l-asparaginase complexed with 6-hydroxy-l-norleucine (see paper)
28% identity, 77% coverage: 77:395/415 of query aligns to 1:314/324 of 1jsrA
1jslA Crystal structure of erwinia chrysanthemi l-asparaginase complexed with 6-hydroxy-d-norleucine (see paper)
28% identity, 77% coverage: 77:395/415 of query aligns to 1:314/324 of 1jslA
6wywA Crystal structure of pseudomonas 7a glutaminase-asparaginase in complex with l-asp at ph 4.5
28% identity, 77% coverage: 77:397/415 of query aligns to 1:309/317 of 6wywA
1ho3A Crystal structure analysis of e. Coli l-asparaginase ii (y25f mutant) (see paper)
28% identity, 77% coverage: 77:395/415 of query aligns to 1:316/326 of 1ho3A
>WP_004042487.1 NCBI__GCF_000337315.1:WP_004042487.1
MNAGDRVRVTRADVTNEGVLMPSSTEDHLVVKLDGGYNVGIAREGADVDVLETDVYDIED
AQSEGDGTSEIEFDDDLPTISLISTGGTIASTVDYRTGAVTAQFDAKDVLRAVPDLAGRA
NYRGRVVANILSENMTTDVWVDLAEAVAEEIEGGADGVVVMHGTDTMQFSASAMSFMLDT
PVPIVFTGSQRSADRPSSDNVMNAVCAVEAAKAEAAEVMVCMHASESDDVCALHEGTRVR
KNHTSRRDAFETVGAKPLGEVDYEAEEVTFRRDYTPRCEADLALHADIESEVELVKFTPG
MDPAALDYLDEKAGVVIEGTGLGHVHTDLIPQFEELVEGGTVVAMTSQCLEGRVCDRVYD
TGRDLLDAGVVEAGDTLPGTAKVKLMWALANVADPTDAMGRNLEGELTQRSVPWE
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory