Comparing WP_004042796.1 NCBI__GCF_000337315.1:WP_004042796.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
2dr1A Crystal structure of the ph1308 protein from pyrococcus horikoshii ot3
34% identity, 96% coverage: 16:369/370 of query aligns to 19:373/381 of 2dr1A
2yrrA Hypothetical alanine aminotransferase (tth0173) from thermus thermophilus hb8
31% identity, 91% coverage: 16:351/370 of query aligns to 3:332/352 of 2yrrA
2yriA Crystal structure of alanine-pyruvate aminotransferase with 2- methylserine
31% identity, 91% coverage: 16:351/370 of query aligns to 3:332/352 of 2yriA
1vjoA Crystal structure of alanine--glyoxylate aminotransferase (alr1004) from nostoc sp. At 1.70 a resolution (see paper)
28% identity, 96% coverage: 13:367/370 of query aligns to 18:375/377 of 1vjoA
3islA Crystal structure of ureidoglycine-glyoxylate aminotransferase (pucg) from bacillus subtilis
29% identity, 91% coverage: 14:350/370 of query aligns to 8:346/387 of 3islA
6pk3B Alanine-glyoxylate aminotransferase 1 (agt1) from arabidopsis thaliana (see paper)
29% identity, 91% coverage: 16:351/370 of query aligns to 11:352/400 of 6pk3B
Q56YA5 Serine--glyoxylate aminotransferase; Alanine--glyoxylate aminotransferase; AGT; Asparagine aminotransferase; Serine--pyruvate aminotransferase; EC 2.6.1.45; EC 2.6.1.44; EC 2.6.1.-; EC 2.6.1.51 from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
29% identity, 91% coverage: 16:351/370 of query aligns to 12:353/401 of Q56YA5
6pk1A Alanine-glyoxylate aminotransferase 1 (agt1) from arabidopsis thaliana in presence of serine (see paper)
29% identity, 91% coverage: 16:351/370 of query aligns to 10:351/399 of 6pk1A
O32148 (S)-ureidoglycine--glyoxylate transaminase; UGXT; (S)-ureidoglycine--glyoxylate aminotransferase; Purine catabolism protein PucG; EC 2.6.1.112 from Bacillus subtilis (strain 168) (see paper)
28% identity, 95% coverage: 1:350/370 of query aligns to 1:368/416 of O32148
2huuA Crystal structure of aedes aegypti alanine glyoxylate aminotransferase in complex with alanine (see paper)
27% identity, 92% coverage: 13:352/370 of query aligns to 19:363/385 of 2huuA
2huiA Crystal structure of aedes aegypti alanine glyoxylate aminotransferase in complex with glyoxylic acid (see paper)
27% identity, 92% coverage: 13:352/370 of query aligns to 19:363/385 of 2huiA
2hufA Crystal structure of aedes aegypti alanine glyoxylate aminotransferase (see paper)
27% identity, 92% coverage: 13:352/370 of query aligns to 19:363/385 of 2hufA
Q3LSM4 Alanine--glyoxylate aminotransferase; EC 2.6.1.44 from Aedes aegypti (Yellowfever mosquito) (Culex aegypti) (see paper)
27% identity, 92% coverage: 13:352/370 of query aligns to 19:363/393 of Q3LSM4
2bkwA Yeast alanine:glyoxylate aminotransferase yfl030w (see paper)
26% identity, 91% coverage: 15:350/370 of query aligns to 5:357/381 of 2bkwA
Sites not aligning to the query:
3kgxA Crystal structure of putative aminotransferase (aah25799.1) from mus musculus at 1.80 a resolution
26% identity, 91% coverage: 14:350/370 of query aligns to 19:358/383 of 3kgxA
Sites not aligning to the query:
6mfbD Crystal structure of 3-hydroxykynurenine transaminase from aedes aegypti
28% identity, 92% coverage: 13:351/370 of query aligns to 18:362/386 of 6mfbD
Q0IG34 3-hydroxykynurenine transaminase; 3-hydroxykynurenine transaminase and alanine--glyoxylate aminotransferase; Ae-HKT/AGT; Alanine--glyoxylate aminotransferase; EC 2.6.1.63; EC 2.6.1.44 from Aedes aegypti (Yellowfever mosquito) (Culex aegypti)
28% identity, 92% coverage: 13:351/370 of query aligns to 18:362/400 of Q0IG34
3ffrA Crystal structure of a phosphoserine aminotransferase serc (chu_0995) from cytophaga hutchinsonii atcc 33406 at 1.75 a resolution
27% identity, 96% coverage: 12:366/370 of query aligns to 2:358/361 of 3ffrA
1iugA The crystal structure of aspartate aminotransferase which belongs to subgroup iv from thermus thermophilus (see paper)
27% identity, 91% coverage: 16:353/370 of query aligns to 3:329/348 of 1iugA
3kgwB Crystal structure of putative aminotransferase (aah25799.1) from mus musculus at 1.65 a resolution
25% identity, 91% coverage: 14:350/370 of query aligns to 23:363/388 of 3kgwB
>WP_004042796.1 NCBI__GCF_000337315.1:WP_004042796.1
MTEKREYTDDYQDKTLYIPGPTEVREDVIAEMCQPMFGHRMDRMTDLYTTIVEDTKEFLG
TDNDVMILTGSGTEIWESSTLNLVDENILVPTCGSFSERHANVAERLGKNVDRIEYEWGQ
AIKPEDIREALESSDKQYDVVATVMNESSTGVRNPIEEIGDVVAEYPDTYLVVDAVSALG
GDYVDIDEHNIDVIFASSQKAFAMPPGLAICTVSDEAYERELSKDSASWYGGFQRALDYY
DRKGQTHSTPAIPIMLAYRKQMKHMLEEGHEGRDKRHREMAEYTREWAYEHFDMFPEEGY
ESQTVACIENTQGIDVAATIEEVNEEYDMAFSNGYGSALGEKTFRIGHMGEHDVESIKAL
TDAIEDVADL
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory