Comparing WP_004514661.1 NCBI__GCF_000012925.1:WP_004514661.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
Q9C969 Aromatic aminotransferase ISS1; Methionine aminotransferase ISS1; Phenylalanine aminotransferase ISS1; Protein INDOLE SEVERE SENSITIVE 1; Protein REVERSAL OF SAV3 PHENOTYPE 1; Tryptophan aminotransferase ISS1; Tyrosine aminotransferase ISS1; EC 2.6.1.27; EC 2.6.1.5; EC 2.6.1.88 from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
28% identity, 90% coverage: 36:387/391 of query aligns to 33:381/394 of Q9C969
1gdeA Crystal structure of pyrococcus protein a-1 e-form (see paper)
26% identity, 98% coverage: 4:386/391 of query aligns to 1:378/388 of 1gdeA
1gd9A Crystall structure of pyrococcus protein-a1 (see paper)
26% identity, 98% coverage: 4:386/391 of query aligns to 1:378/388 of 1gd9A
P14909 Aspartate aminotransferase; AspAT; Transaminase A; EC 2.6.1.1 from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (Sulfolobus solfataricus) (see 3 papers)
27% identity, 91% coverage: 34:390/391 of query aligns to 36:395/402 of P14909
Sites not aligning to the query:
Q58097 (5-formylfuran-3-yl)methyl phosphate transaminase; 4-HFC-P:alanine aminotransferase; EC 2.6.1.108 from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii)
27% identity, 93% coverage: 24:387/391 of query aligns to 20:365/370 of Q58097
2o1bA Structure of aminotransferase from staphylococcus aureus
25% identity, 91% coverage: 35:390/391 of query aligns to 21:372/376 of 2o1bA
1b5oA Thermus thermophilus aspartate aminotransferase single mutant 1 (see paper)
29% identity, 91% coverage: 32:386/391 of query aligns to 30:378/382 of 1b5oA
1gc4A Thermus thermophilus aspartate aminotransferase tetra mutant 2 complexed with aspartate (see paper)
29% identity, 91% coverage: 32:386/391 of query aligns to 30:378/382 of 1gc4A
1gc3A Thermus thermophilus aspartate aminotransferase tetra mutant 2 complexed with tryptophan (see paper)
29% identity, 91% coverage: 32:386/391 of query aligns to 30:378/382 of 1gc3A
Sites not aligning to the query:
Q56232 Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) (see 3 papers)
29% identity, 91% coverage: 32:386/391 of query aligns to 30:378/385 of Q56232
Sites not aligning to the query:
1bkgA Aspartate aminotransferase from thermus thermophilus with maleate (see paper)
29% identity, 91% coverage: 32:386/391 of query aligns to 30:378/382 of 1bkgA
1bjwA Aspartate aminotransferase from thermus thermophilus (see paper)
29% identity, 91% coverage: 32:386/391 of query aligns to 30:378/382 of 1bjwA
1o4sB Crystal structure of aspartate aminotransferase (tm1255) from thermotoga maritima at 1.90 a resolution (see paper)
27% identity, 91% coverage: 32:385/391 of query aligns to 36:377/384 of 1o4sB
1j32A Aspartate aminotransferase from phormidium lapideum
27% identity, 90% coverage: 36:387/391 of query aligns to 30:381/388 of 1j32A
5wmhA Arabidopsis thaliana prephenate aminotransferase (see paper)
25% identity, 98% coverage: 4:387/391 of query aligns to 1:393/399 of 5wmhA
5wmiA Arabidopsis thaliana prephenate aminotransferase mutant- t84v (see paper)
25% identity, 95% coverage: 17:387/391 of query aligns to 18:393/402 of 5wmiA
Sites not aligning to the query:
5wmlA Arabidopsis thaliana prephenate aminotransferase mutant- k306a (see paper)
25% identity, 98% coverage: 3:387/391 of query aligns to 1:394/404 of 5wmlA
8wkjA The crystal structure of aspartate aminotransferases lpg0070 from legionella pneumophila (see paper)
24% identity, 95% coverage: 1:371/391 of query aligns to 1:372/391 of 8wkjA
6f35A Crystal structure of the aspartate aminotranferase from rhizobium meliloti (see paper)
25% identity, 98% coverage: 3:386/391 of query aligns to 2:392/400 of 6f35A
P58350 Aspartate aminotransferase; AAT; AspAT; Putative 2-aminoadipate transaminase; Transaminase A; EC 2.6.1.1; EC 2.6.1.39 from Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti) (see paper)
25% identity, 98% coverage: 3:386/391 of query aligns to 12:402/410 of P58350
>WP_004514661.1 NCBI__GCF_000012925.1:WP_004514661.1
MKFAISDQIRSVHAPPITEVKGWLASREPDPGRHLIDLCQAVPDYAPARQLTDYLATCLD
DPAMAKYSPDEGLLEVREGVCARYGRVYGAAPAPEGVCLTIGASQAFWLAMVTLCRAGDE
VIVPLPAYFDHPMALEMLGLRPVWLPFDEKRGGVVDPAAVERLITPRTRAILLVTPSNPT
GVVTPPDVIHELYSLARRRGTALVIDETYADFIPGGAAPHDLFADPHWGDHLVQIMSFGK
TYALTGYRAGCLVASDAFISHALKAQDTMAVCQPRITQHAVLYGVRHLDDWVAENRLMME
RRHDLFRSVFTRPGNPFELAASGTFFAWVRHPFPGKTGREAARRLAVEAGVICLPGEVFG
PGLEPYLRLAFGNIREEAIPEAVERFRGLAV
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory