Comparing WP_005347177.1 NCBI__GCF_000173975.1:WP_005347177.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 2 hits to proteins with known functional sites (download)
P0A9J8 Bifunctional chorismate mutase/prephenate dehydratase; Chorismate mutase-prephenate dehydratase; P-protein; EC 5.4.99.5; EC 4.2.1.51 from Escherichia coli (strain K12)
23% identity, 35% coverage: 185:284/287 of query aligns to 285:378/386 of P0A9J8
Sites not aligning to the query:
2qmxA The crystal structure of l-phe inhibited prephenate dehydratase from chlorobium tepidum tls (see paper)
26% identity, 29% coverage: 199:282/287 of query aligns to 192:274/278 of 2qmxA
Sites not aligning to the query:
>WP_005347177.1 NCBI__GCF_000173975.1:WP_005347177.1
MDLSDVRKNIDRVDAEIRKLFVERMTLADQVACIKAETEDKIYKPDREEIIIKKQTEGMK
PELVREYTALIKRIMEVSRKYQYGRTLELRQCFPFEYSKMPAVILKPTMVKEELYICEDF
SKDKVITVSSYEEIGNYIKEGKADAGIGIIEEVGIGVSDELHNLLAEKDLYITHCKVQED
GGVRRKVVTFTDKLVVLPSHNRVKVMFECPNHSGSISSILSMISDYGVNLTEIHSRPFWK
DNSWNYKFFVEMNANIDTKEIRALIYQLSQETAYLKILGSYACEGDF
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory