Comparing WP_005347646.1 NCBI__GCF_000173975.1:WP_005347646.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 10 hits to proteins with known functional sites (download)
2pc6A Crystal structure of putative acetolactate synthase- small subunit from nitrosomonas europaea (see paper)
39% identity, 66% coverage: 10:123/172 of query aligns to 3:115/164 of 2pc6A
A0QUX7 Acetolactate synthase small subunit; Acetohydroxy-acid synthase small subunit; AHAS; ALS; EC 2.2.1.6 from Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium smegmatis) (see paper)
33% identity, 88% coverage: 13:164/172 of query aligns to 10:159/170 of A0QUX7
P9WKJ3 Putative acetolactate synthase small subunit; Acetohydroxy-acid synthase small subunit; AHAS; ALS; EC 2.2.1.6 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
32% identity, 91% coverage: 9:164/172 of query aligns to 4:157/168 of P9WKJ3
Q9FFF4 Acetolactate synthase small subunit 2, chloroplastic; ALS-interacting protein 3; Acetohydroxy-acid synthase small subunit 2; Protein valine-tolerant 1 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
30% identity, 91% coverage: 9:164/172 of query aligns to 75:226/477 of Q9FFF4
Sites not aligning to the query:
6vz8F Arabidopsis thaliana acetohydroxyacid synthase complex with valine bound (see paper)
28% identity, 94% coverage: 9:169/172 of query aligns to 3:159/159 of 6vz8F
Q93YZ7 Acetolactate synthase small subunit 1, chloroplastic; ALS-interacting protein 1; Acetohydroxyacid synthase small subunit 1 from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
28% identity, 91% coverage: 9:164/172 of query aligns to 85:236/491 of Q93YZ7
Sites not aligning to the query:
6vz8G Arabidopsis thaliana acetohydroxyacid synthase complex with valine bound (see paper)
28% identity, 91% coverage: 9:164/172 of query aligns to 2:155/159 of 6vz8G
O60086 Probable acetolactate synthase small subunit; Acetohydroxy-acid synthase small subunit; AHAS; ALS from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
27% identity, 92% coverage: 7:164/172 of query aligns to 66:262/289 of O60086
Sites not aligning to the query:
6wo1B Hybrid acetohydroxyacid synthase complex structure with cryptococcus neoformans ahas catalytic subunit and saccharomyces cerevisiae ahas regulatory subunit (see paper)
34% identity, 53% coverage: 8:99/172 of query aligns to 2:93/197 of 6wo1B
6u9dL Saccharomyces cerevisiae acetohydroxyacid synthase (see paper)
34% identity, 53% coverage: 8:99/172 of query aligns to 35:126/255 of 6u9dL
Sites not aligning to the query:
>WP_005347646.1 NCBI__GCF_000173975.1:WP_005347646.1
MREINTEKKKRWVSLYVENRIGVLARISGMMSGKSYNISSITVGVTEDPTVSRMTIGLSS
DDATFEQIKKQLNRCVEVIKLNDITDAPTHMKEILFVKIHECSEFEKGEIFRISQVFGAK
AIDYGINSVLLESVNTEGRNNDLIALLTRKFDHVEVVRGGIVAIESISMIDR
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory