Comparing WP_007475328.1 NCBI__GCF_000170735.1:WP_007475328.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
5ey5A Lbcats
35% identity, 99% coverage: 2:238/240 of query aligns to 17:256/261 of 5ey5A
6uapC Crystal structure of tryptophan synthase from m. Tuberculosis - open form with brd6309 bound
30% identity, 93% coverage: 2:224/240 of query aligns to 17:239/250 of 6uapC
6usaA Crystal structure of tryptophan synthase from m. Tuberculosis - aminoacrylate- and gsk1-bound form (see paper)
29% identity, 93% coverage: 2:224/240 of query aligns to 18:238/249 of 6usaA
6u6cA Crystal structure of tryptophan synthase from m. Tuberculosis - aminoacrylate- and gsk2-bound form (see paper)
29% identity, 93% coverage: 2:224/240 of query aligns to 18:238/249 of 6u6cA
6dweA Crystal structure of tryptophan synthase from m. Tuberculosis - aminoacrylate- and brd0059-bound form
29% identity, 93% coverage: 2:224/240 of query aligns to 18:238/249 of 6dweA
5tciA Crystal structure of tryptophan synthase from m. Tuberculosis - brd4592-bound form (see paper)
29% identity, 93% coverage: 2:224/240 of query aligns to 18:238/249 of 5tciA
6u6cE Crystal structure of tryptophan synthase from m. Tuberculosis - aminoacrylate- and gsk2-bound form (see paper)
29% identity, 93% coverage: 2:224/240 of query aligns to 17:236/245 of 6u6cE
Sites not aligning to the query:
1cx9A Crystal structure of the complex of bacterial tryptophan synthase with the transition state analogue inhibitor 4-(2-aminophenylthio)- butylphosphonic acid (see paper)
26% identity, 92% coverage: 5:224/240 of query aligns to 19:248/264 of 1cx9A
1cw2A Crystal structure of the complex of bacterial tryptophan synthase with the transition state analogue inhibitor 4-(2-hydroxyphenylsulfinyl)- butylphosphonic acid (see paper)
26% identity, 92% coverage: 5:224/240 of query aligns to 19:248/264 of 1cw2A
1c9dA Crystal structure of the complex of bacterial tryptophan synthase with the transition state analogue inhibitor 4-(2-hydroxy-4- fluorophenylthio)-butylphosphonic acid (see paper)
26% identity, 92% coverage: 5:224/240 of query aligns to 19:248/264 of 1c9dA
1c29A Crystal structure of the complex of bacterial tryptophan synthase with the transition state analogue inhibitor 4-(2-hydroxyphenylthio)-1- butenylphosphonic acid (see paper)
26% identity, 92% coverage: 5:224/240 of query aligns to 19:248/264 of 1c29A
1k3uA Crystal structure of wild-type tryptophan synthase complexed with n- [1h-indol-3-yl-acetyl]aspartic acid (see paper)
26% identity, 92% coverage: 5:224/240 of query aligns to 20:251/268 of 1k3uA
7jllA The internal aldimine crystal structure of salmonella typhimurium tryptophan synthase mutant beta-s377a in complex with inhibitor 2- ({[4-(trifluoromethoxy)phenyl]sulfonyl}amino)ethyl dihydrogen phosphate (f9f) at the alpha-site, cesium ion at the metal coordination site and l-tryptophan at the enzyme beta-site
26% identity, 92% coverage: 5:224/240 of query aligns to 19:250/267 of 7jllA
6xncA Salmonella typhimurium tryptophan synthase complexed with l-tryptophan and d-glycerol-3-phosphate (see paper)
26% identity, 92% coverage: 5:224/240 of query aligns to 19:250/267 of 6xncA
1tjpA Crystal structure of wild-type tryptophan synthase complexed with 1- [(2-hydroxylphenyl)amino]3-glycerolphosphate (see paper)
26% identity, 92% coverage: 5:224/240 of query aligns to 20:251/267 of 1tjpA
8b08A Tryptophan synthase - cryo-trapping by the spitrobot crystal plunger after 30 sec (see paper)
26% identity, 92% coverage: 5:224/240 of query aligns to 21:252/269 of 8b08A
2clkA Tryptophan synthase in complex with d-glyceraldehyde 3- phosphate (g3p) (see paper)
26% identity, 92% coverage: 5:224/240 of query aligns to 20:251/267 of 2clkA
3cepA Structure of a tryptophan synthase quinonoid intermediate (see paper)
26% identity, 92% coverage: 5:224/240 of query aligns to 19:250/266 of 3cepA
2trsA Crystal structures of mutant (betak87t) tryptophan synthase alpha2 beta2 complex with ligands bound to the active sites of the alpha and beta subunits reveal ligand-induced conformational changes (see paper)
25% identity, 92% coverage: 5:224/240 of query aligns to 20:245/262 of 2trsA
1a50A Crystal structure of wild-type tryptophan synthase complexed with 5- fluoroindole propanol phosphate (see paper)
25% identity, 92% coverage: 5:224/240 of query aligns to 19:244/260 of 1a50A
>WP_007475328.1 NCBI__GCF_000170735.1:WP_007475328.1
MKKLIAYITTAYPDKEFTIDLIHSLKENGVDGIELGIPFSDPVADGEIIQEVNKRALQNG
YKINDTFYVSEKTGNIIDTYWMGYFNNFYHKGYNFMIEKAKEYNIKGFIIPDLPYEEAIE
YENKFPLISFVAPTDSLERIKTILQNPKEFIYLVAYAGITGSDKKEDLSNIIKYIKEIIS
TPLYIGFGVNENTAREKAKNVDGVIVGSTFVKVLLEDISNTEKIKKISQKAKIIKESIND
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory