Comparing WP_007691604.1 NCBI__GCF_000336675.1:WP_007691604.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 10 hits to proteins with known functional sites (download)
2afbA Crystal structure of 2-dehydro-3- deoxygluconokinase (ec 2.7.1.45) (tm0067) from thermotoga maritima at 2.05 a resolution (see paper)
24% identity, 96% coverage: 4:305/314 of query aligns to 8:327/329 of 2afbA
Sites not aligning to the query:
Q97U29 2-dehydro-3-deoxygluconokinase/2-dehydro-3-deoxygalactonokinase; 2-dehydro-3-deoxyglucono/galactono-kinase; 2-keto-3-deoxy-galactonokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; KDGal kinase; EC 2.7.1.178 from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (Sulfolobus solfataricus) (see paper)
24% identity, 93% coverage: 1:291/314 of query aligns to 1:293/313 of Q97U29
Sites not aligning to the query:
2varA Crystal structure of sulfolobus solfataricus 2-keto-3-deoxygluconate kinase complexed with 2-keto-3-deoxygluconate (see paper)
23% identity, 92% coverage: 3:291/314 of query aligns to 2:292/311 of 2varA
Sites not aligning to the query:
2dcnA Crystal structure of 2-keto-3-deoxygluconate kinase from sulfolobus tokodaii complexed with 2-keto-6-phosphogluconate (alpha-furanose form)
24% identity, 92% coverage: 2:291/314 of query aligns to 1:290/308 of 2dcnA
Sites not aligning to the query:
8cqxA Ribokinase from t.Sp mutant a92g
27% identity, 84% coverage: 34:296/314 of query aligns to 37:288/300 of 8cqxA
1v1aA 2-keto-3-deoxygluconate kinase from thermus thermophilus with bound 2- keto-3-deoxygluconate and adp (see paper)
25% identity, 86% coverage: 1:269/314 of query aligns to 1:264/301 of 1v1aA
Sites not aligning to the query:
1v1bA 2-keto-3-deoxygluconate kinase from thermus thermophilus with bound atp (see paper)
25% identity, 86% coverage: 1:269/314 of query aligns to 1:264/300 of 1v1bA
Sites not aligning to the query:
3ktnA Crystal structure of a putative 2-keto-3-deoxygluconate kinase from enterococcus faecalis
24% identity, 92% coverage: 6:294/314 of query aligns to 6:317/340 of 3ktnA
Q53W83 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) (see paper)
25% identity, 86% coverage: 1:269/314 of query aligns to 1:264/309 of Q53W83
Sites not aligning to the query:
6znxC Ribokinase from thermus species
28% identity, 84% coverage: 34:296/314 of query aligns to 24:253/265 of 6znxC
>WP_007691604.1 NCBI__GCF_000336675.1:WP_007691604.1
MADLLALGVSVLELTPPEHRRLETAERFAAGVAGPESNTTIAASRLGADAAWVSKLPGNP
LGRRVAGALRRHGVETAVSWAETGRQGLAFTERAGDPRGGMTLHDRNAPVASMQPADLPA
TATERASMVLTSGATATLSETLTETTRTVFEECAAGETTTVCSLSRPRVVESGSVCEALS
PLLAATDVLLTTEAGAAAFVDRATPTETAHALAAGHGFETVVLVRADLGAVVWHDNRVDD
HDVPATDAVDDRGAFDALCGGFLARRIAGESPDRALAAGVACGALARTVAGPVPTVDPAA
VERCADSMDGSTVE
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory