SitesBLAST
Comparing WP_007703102.1 NCBI__GCF_001277175.1:WP_007703102.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
5aovA Ternary crystal structure of pyrococcus furiosus glyoxylate hydroxypyruvate reductase in presence of glyoxylate (see paper)
41% identity, 100% coverage: 1:324/324 of query aligns to 1:327/334 of 5aovA
- active site: L100 (= L99), R241 (= R237), D265 (= D261), E270 (= E266), H288 (= H285)
- binding glyoxylic acid: M52 (≠ S52), L53 (vs. gap), L53 (vs. gap), Y74 (≠ V73), A75 (≠ S74), V76 (= V75), G77 (= G76), R241 (= R237), H288 (= H285)
- binding nadp nicotinamide-adenine-dinucleotide phosphate: V76 (= V75), T104 (≠ V103), F158 (≠ M153), G159 (= G154), R160 (= R155), I161 (= I156), S180 (≠ A176), R181 (= R177), A211 (≠ I207), V212 (≠ L208), P213 (= P209), T218 (= T214), I239 (≠ A235), A240 (≠ G236), R241 (= R237), H288 (= H285), G290 (= G287)
6biiA Crystal structure of pyrococcus yayanosii glyoxylate hydroxypyruvate reductase in complex with NADP and malonate (re-refinement of 5aow) (see paper)
41% identity, 100% coverage: 2:324/324 of query aligns to 1:326/332 of 6biiA
- active site: L99 (= L99), R240 (= R237), D264 (= D261), E269 (= E266), H287 (= H285)
- binding nadp nicotinamide-adenine-dinucleotide phosphate: V75 (= V75), T103 (≠ V103), G156 (= G152), F157 (≠ M153), G158 (= G154), R159 (= R155), I160 (= I156), A179 (= A176), R180 (= R177), S181 (≠ R178), K183 (≠ H180), V211 (≠ L208), P212 (= P209), E216 (= E213), T217 (= T214), V238 (≠ A235), A239 (≠ G236), R240 (= R237), D264 (= D261), H287 (= H285), G289 (= G287)
2dbqA Crystal structure of glyoxylate reductase (ph0597) from pyrococcus horikoshii ot3, complexed with NADP (i41) (see paper)
41% identity, 100% coverage: 1:324/324 of query aligns to 1:327/333 of 2dbqA
- active site: L100 (= L99), R241 (= R237), D265 (= D261), E270 (= E266), H288 (= H285)
- binding nadp nicotinamide-adenine-dinucleotide phosphate: V76 (= V75), T104 (≠ V103), L158 (≠ M153), G159 (= G154), R160 (= R155), I161 (= I156), S180 (≠ A176), R181 (= R177), T182 (≠ R178), A211 (≠ I207), V212 (≠ L208), P213 (= P209), T218 (= T214), I239 (≠ A235), A240 (≠ G236), R241 (= R237), D265 (= D261), H288 (= H285), G290 (= G287)
O58320 Glyoxylate reductase; EC 1.1.1.26 from Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
41% identity, 100% coverage: 1:324/324 of query aligns to 1:327/334 of O58320
2gcgA Ternary crystal structure of human glyoxylate reductase/hydroxypyruvate reductase (see paper)
45% identity, 82% coverage: 46:312/324 of query aligns to 48:316/324 of 2gcgA
- active site: L103 (= L99), R241 (= R237), D265 (= D261), E270 (= E266), H289 (= H285)
- binding (2r)-2,3-dihydroxypropanoic acid: L55 (vs. gap), S78 (= S74), V79 (= V75), G80 (= G76), R241 (= R237), H289 (= H285)
- binding nadph dihydro-nicotinamide-adenine-dinucleotide phosphate: V79 (= V75), T107 (≠ V103), G156 (= G152), G158 (= G154), I160 (= I156), G180 (≠ A176), R181 (= R177), R184 (≠ H180), C212 (≠ L208), S213 (≠ P209), T218 (= T214), I239 (≠ A235), R241 (= R237), D265 (= D261), H289 (= H285), G291 (= G287)
Q9UBQ7 Glyoxylate reductase/hydroxypyruvate reductase; EC 1.1.1.79; EC 1.1.1.81 from Homo sapiens (Human) (see paper)
45% identity, 82% coverage: 46:312/324 of query aligns to 52:320/328 of Q9UBQ7
- VG 83:84 (= VG 75:76) binding substrate
- GRI 162:164 (= GRI 154:156) binding NADP(+)
- RQPR 185:188 (≠ RRHH 177:180) binding NADP(+)
- S217 (≠ P209) binding NADP(+)
- I243 (≠ A235) binding NADP(+)
- R245 (= R237) binding substrate
- D269 (= D261) binding substrate
- HIGS 293:296 (= HIGS 285:288) binding substrate
- G295 (= G287) binding NADP(+)
1wwkA Crystal structure of phosphoglycerate dehydrogenase from pyrococcus horikoshii ot3
38% identity, 81% coverage: 49:311/324 of query aligns to 46:304/304 of 1wwkA
- active site: S96 (≠ L99), R230 (= R237), D254 (= D261), E259 (= E266), H278 (= H285)
- binding nicotinamide-adenine-dinucleotide: V100 (= V103), G146 (= G152), F147 (≠ M153), G148 (= G154), R149 (= R155), I150 (= I156), Y168 (= Y174), D169 (≠ N175), P170 (≠ A176), V201 (≠ L208), P202 (= P209), T207 (= T214), T228 (≠ A235), S229 (≠ G236), D254 (= D261), H278 (= H285), G280 (= G287)
3bazA Structure of hydroxyphenylpyruvate reductase from coleus blumei in complex with NADP+ (see paper)
40% identity, 78% coverage: 52:305/324 of query aligns to 51:297/311 of 3bazA
- active site: L98 (= L99), R230 (= R237), A251 (= A258), D254 (= D261), E259 (= E266), H277 (= H285)
- binding nadp nicotinamide-adenine-dinucleotide phosphate: V74 (= V75), G149 (= G152), L150 (≠ M153), G151 (= G154), R152 (= R155), I153 (= I156), S172 (≠ A176), R173 (= R177), S174 (≠ R178), C201 (≠ L208), P202 (= P209), T207 (= T214), I228 (≠ A235), G229 (= G236), R230 (= R237), D254 (= D261), H277 (= H285), G279 (= G287)
Q65CJ7 Hydroxyphenylpyruvate reductase; HPPR; EC 1.1.1.237 from Plectranthus scutellarioides (Coleus) (Solenostemon scutellarioides) (see paper)
40% identity, 78% coverage: 52:305/324 of query aligns to 53:299/313 of Q65CJ7
4e5pA Thermostable phosphite dehydrogenase a176r variant in complex with nad (see paper)
32% identity, 98% coverage: 1:319/324 of query aligns to 1:326/332 of 4e5pA
- active site: L100 (= L99), R237 (= R237), D261 (= D261), E266 (= E266), H292 (= H285)
- binding nicotinamide-adenine-dinucleotide: K76 (≠ V75), L100 (= L99), T104 (≠ V103), G154 (= G154), A155 (≠ R155), I156 (= I156), A175 (= A176), R176 (= R177), L208 (= L208), P209 (= P209), T214 (= T214), P235 (≠ A235), C236 (≠ G236), R237 (= R237), H292 (= H285)
4e5mA Thermostable phosphite dehydrogenase e175a/a176r in complex with NADP (see paper)
32% identity, 98% coverage: 1:319/324 of query aligns to 1:326/329 of 4e5mA
- active site: L100 (= L99), R237 (= R237), D261 (= D261), E266 (= E266), H292 (= H285)
- binding nadp nicotinamide-adenine-dinucleotide phosphate: K76 (≠ V75), L100 (= L99), T104 (≠ V103), G154 (= G154), A155 (≠ R155), I156 (= I156), R176 (= R177), L208 (= L208), P209 (= P209), T214 (= T214), P235 (≠ A235), C236 (≠ G236), R237 (= R237), H292 (= H285), G294 (= G287)
4e5kA Thermostable phosphite dehydrogenase in complex with NAD and sulfite (see paper)
32% identity, 98% coverage: 1:319/324 of query aligns to 1:326/329 of 4e5kA
- active site: L100 (= L99), R237 (= R237), D261 (= D261), E266 (= E266), H292 (= H285)
- binding nicotinamide-adenine-dinucleotide: K76 (≠ V75), G77 (= G76), L100 (= L99), T104 (≠ V103), G152 (= G152), G154 (= G154), A155 (≠ R155), I156 (= I156), H174 (≠ N175), E175 (vs. gap), A176 (= A176), A207 (≠ I207), L208 (= L208), P209 (= P209), P235 (≠ A235), C236 (≠ G236), R237 (= R237), D261 (= D261), H292 (= H285), G294 (= G287)
- binding sulfite ion: M53 (≠ S52), L75 (≠ S74), K76 (≠ V75), G77 (= G76), L100 (= L99), R237 (= R237), H292 (= H285)
6ih6A Phosphite dehydrogenase mutant i151r/p176r/m207a from ralstonia sp. 4506 in complex with non-natural cofactor nicotinamide cytosine dinucleotide
35% identity, 98% coverage: 1:319/324 of query aligns to 1:327/330 of 6ih6A
- binding [[(2S,3S,4R,5S)-5-(3-aminocarbonylpyridin-1-ium-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2S,3S,4R,5S)-5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate: T104 (≠ V103), R151 (≠ V151), G154 (= G154), A155 (≠ R155), V156 (≠ I156), D175 (≠ A176), A207 (≠ I207), V208 (≠ L208), P209 (= P209), T214 (= T214), A235 (= A235), C236 (≠ G236), R237 (= R237)
5v7nA Crystal structure of NADPH-dependent glyoxylate/hydroxypyruvate reductase smc04462 (smghrb) from sinorhizobium meliloti in complex with NADP and 2-keto-d-gluconic acid (see paper)
34% identity, 94% coverage: 2:305/324 of query aligns to 2:296/319 of 5v7nA
- active site: L95 (= L99), R229 (= R237), D253 (= D261), E258 (= E266), H276 (= H285)
- binding 2-keto-D-gluconic acid: G70 (≠ S74), V71 (= V75), G72 (= G76), R229 (= R237), H276 (= H285), S279 (= S288), R285 (= R294)
- binding nadp nicotinamide-adenine-dinucleotide phosphate: V71 (= V75), V99 (= V103), L149 (≠ M153), G150 (= G154), R151 (= R155), I152 (= I156), T171 (≠ H180), R172 (≠ S181), V200 (≠ L208), P201 (= P209), S205 (≠ E213), T206 (= T214), V227 (≠ A235), G228 (= G236), R229 (= R237), H276 (= H285), A278 (≠ G287)
5v6qB Crystal structure of NADPH-dependent glyoxylate/hydroxypyruvate reductase smc04462 (smghrb) from sinorhizobium meliloti in complex with NADP and malonate (see paper)
34% identity, 94% coverage: 2:305/324 of query aligns to 3:297/319 of 5v6qB
- active site: L96 (= L99), R230 (= R237), D254 (= D261), E259 (= E266), H277 (= H285)
- binding nadp nicotinamide-adenine-dinucleotide phosphate: V72 (= V75), V100 (= V103), F148 (≠ V151), L150 (≠ M153), G151 (= G154), R152 (= R155), I153 (= I156), T172 (≠ H180), R173 (≠ S181), V201 (≠ L208), P202 (= P209), S206 (≠ E213), T207 (= T214), V228 (≠ A235), G229 (= G236), R230 (= R237), H277 (= H285), A279 (≠ G287)
5v7gA Crystal structure of NADPH-dependent glyoxylate/hydroxypyruvate reductase smc04462 (smghrb) from sinorhizobium meliloti in complex with NADPH and oxalate (see paper)
34% identity, 94% coverage: 2:305/324 of query aligns to 1:295/317 of 5v7gA
- active site: L94 (= L99), R228 (= R237), D252 (= D261), E257 (= E266), H275 (= H285)
- binding nadph dihydro-nicotinamide-adenine-dinucleotide phosphate: V70 (= V75), V98 (= V103), F146 (≠ V151), L148 (≠ M153), G149 (= G154), R150 (= R155), I151 (= I156), T170 (≠ H180), R171 (≠ S181), V199 (≠ L208), P200 (= P209), S204 (≠ E213), T205 (= T214), V226 (≠ A235), G227 (= G236), R228 (= R237), H275 (= H285), A277 (≠ G287)
- binding oxalate ion: G69 (≠ S74), V70 (= V75), G71 (= G76), R228 (= R237), H275 (= H285)
5j23A Crystal structure of NADPH-dependent glyoxylate/hydroxypyruvate reductase smc04462 (smghrb) from sinorhizobium meliloti in complex with 2'-phospho-adp-ribose (see paper)
34% identity, 94% coverage: 2:305/324 of query aligns to 1:295/318 of 5j23A
- active site: L94 (= L99), R228 (= R237), D252 (= D261), E257 (= E266), H275 (= H285)
- binding [(2r,3r,4r,5r)-5-(6-amino-9h-purin-9-yl)-3-hydroxy-4-(phosphonooxy)tetrahydrofuran-2-yl]methyl [(2r,3s,4r,5r)-3,4,5-trihydroxytetrahydrofuran-2-yl]methyl dihydrogen diphosphate: V70 (= V75), L148 (≠ M153), G149 (= G154), R150 (= R155), I151 (= I156), T170 (≠ H180), R171 (≠ S181), P200 (= P209), S204 (≠ E213), T205 (= T214), R228 (= R237)
3ddnB Crystal structure of hydroxypyruvic acid phosphate bound d-3- phosphoglycerate dehydrogenase in mycobacterium tuberculosis (see paper)
36% identity, 86% coverage: 41:319/324 of query aligns to 38:312/525 of 3ddnB
3dc2A Crystal structure of serine bound d-3-phosphoglycerate dehydrogenase from mycobacterium tuberculosis (see paper)
36% identity, 86% coverage: 41:319/324 of query aligns to 37:311/526 of 3dc2A
Sites not aligning to the query:
3kb6B Crystal structure of d-lactate dehydrogenase from aquifex aeolicus complexed with NAD and lactic acid (see paper)
32% identity, 96% coverage: 6:315/324 of query aligns to 3:324/334 of 3kb6B
- active site: S97 (≠ L99), R231 (= R237), D255 (= D261), E260 (= E266), H294 (= H285)
- binding lactic acid: F49 (vs. gap), S72 (= S74), V73 (= V75), G74 (= G76), Y96 (≠ V98), R231 (= R237), H294 (= H285)
- binding nicotinamide-adenine-dinucleotide: V73 (= V75), Y96 (≠ V98), V101 (= V103), G150 (= G154), R151 (= R155), I152 (= I156), D171 (≠ N175), V172 (≠ A176), P203 (= P209), T229 (≠ A235), A230 (≠ G236), R231 (= R237), H294 (= H285), A296 (≠ G287), Y297 (≠ S288)
Query Sequence
>WP_007703102.1 NCBI__GCF_001277175.1:WP_007703102.1
MKPSIILYKSLPDDLLDRLESHFNVTRVSDLSPETVTAHASAFSEAQGLLGSSEKVDAAL
LEKMPALRAASTVSVGYDNFDVDALSAKKIALMHTPTVLTETVADTLMTLVLTTARRALE
VAERVKAGEWTGSIGPDWFGCDVHHKTLGIVGMGRIGLALGQRAHFGFNMPILYNARRHH
SEAEERFNARYCDLDTLLAESDFVCVILPLTDETHHMIGAEQFRKMKKSAIFINAGRGPV
VDENALIAALQSGEIHAAGLDVFEQEPLSKDSPLLTLKNVVALPHIGSATHETRYNMAAC
AVDNLINALNGDVSQNCVNPNAVK
Or try a new SitesBLAST search
SitesBLAST's Database
SitesBLAST's database includes
(1) SwissProt
entries with experimentally-supported functional features;
and (2) protein structures with bound ligands, from the
BioLip database.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory