SitesBLAST
Comparing WP_008506596.1 NCBI__GCF_000022745.1:WP_008506596.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 20 (the maximum) hits to proteins with known functional sites (download)
6zngF Maeb full-length acetyl-coa bound state (see paper)
47% identity, 98% coverage: 16:762/764 of query aligns to 2:743/753 of 6zngF
- active site: Y38 (= Y52), A74 (= A88), K93 (= K107), E135 (= E149), D136 (= D150), D160 (= D174), D161 (= D175), N286 (= N300)
- binding acetyl coenzyme *a: R511 (≠ L529), K514 (≠ R532), Y552 (= Y571), A553 (= A572), R557 (≠ D576), L560 (≠ R579), P571 (≠ M590), T590 (≠ A609), V591 (= V610), N592 (≠ H611), L593 (≠ E612), Y625 (≠ F644), Q659 (≠ S679), L690 (≠ N709), N694 (≠ S713), Q724 (≠ T743)
P76558 NADP-dependent malic enzyme; NADP-ME; EC 1.1.1.40 from Escherichia coli (strain K12) (see paper)
46% identity, 97% coverage: 19:762/764 of query aligns to 6:754/759 of P76558
- K56 (≠ R69) modified: N6-acetyllysine
6zn4A Maeb malic enzyme domain apoprotein (see paper)
62% identity, 53% coverage: 16:421/764 of query aligns to 1:406/406 of 6zn4A
6zn7A Maeb malic enzyme domain apoprotein (see paper)
62% identity, 53% coverage: 16:420/764 of query aligns to 1:405/405 of 6zn7A
- active site: Y37 (= Y52), A73 (= A88), K92 (= K107), E134 (= E149), D135 (= D150), D159 (= D174), D160 (= D175), N285 (= N300)
- binding magnesium ion: E134 (= E149), D135 (= D150), D160 (= D175)
- binding nadp nicotinamide-adenine-dinucleotide phosphate: T164 (= T179), N191 (= N206), A193 (= A208), G194 (= G209), A195 (≠ S210), S196 (≠ A211), D218 (= D233), S219 (≠ T234), K235 (= K250), L260 (≠ V275), S261 (= S276), V262 (≠ A277), M283 (= M298), N285 (= N300), V315 (= V330)
5ceeA Malic enzyme from candidatus phytoplasma aywb in complex with NAD and mg2+ (see paper)
46% identity, 49% coverage: 47:417/764 of query aligns to 29:385/387 of 5ceeA
- active site: Y34 (= Y52), A70 (= A88), K89 (= K107), E131 (= E149), D132 (= D150), D156 (= D174), D157 (= D175), N283 (= N300)
- binding magnesium ion: E131 (= E149), D132 (= D150), D157 (= D175)
- binding nicotinamide-adenine-dinucleotide: T161 (= T179), N188 (= N206), G189 (= G207), G191 (= G209), A193 (= A211), D213 (= D233), K214 (≠ T234), V258 (= V275), S259 (= S276), I263 (≠ A280), L281 (≠ M298), N283 (= N300), V312 (= V330), N314 (= N332)
2dvmA NAD complex structure of ph1275 protein from pyrococcus horikoshii
45% identity, 52% coverage: 20:418/764 of query aligns to 3:397/438 of 2dvmA
- active site: Y37 (= Y52), R73 (≠ A88), K92 (= K107), E134 (= E149), D135 (= D150), D159 (= D174), D160 (= D175), N296 (= N300)
- binding nicotinamide-adenine-dinucleotide: T164 (= T179), G194 (= G209), A195 (≠ S210), A196 (= A211), V217 (≠ C232), E218 (≠ D233), L219 (≠ V238), P224 (≠ E243), F269 (= F273), T270 (≠ G274), L294 (≠ M298), N296 (= N300), N327 (= N332)
2a9fA Crystal structure of a putative malic enzyme ((s)-malate:nad+ oxidoreductase (decarboxylating))
50% identity, 46% coverage: 26:377/764 of query aligns to 12:357/383 of 2a9fA
2haeD Crystal structure of a putative malic enzyme (malate oxidoreductase)
42% identity, 51% coverage: 21:412/764 of query aligns to 1:373/373 of 2haeD
2haeB Crystal structure of a putative malic enzyme (malate oxidoreductase)
42% identity, 51% coverage: 21:412/764 of query aligns to 1:373/373 of 2haeB
- active site: Y31 (= Y52), A67 (= A88), K86 (= K107), E128 (= E149), D129 (= D150), D153 (= D174), D154 (= D175), N280 (= N300)
- binding nicotinamide-adenine-dinucleotide: T158 (= T179), N185 (= N206), G188 (= G209), A189 (≠ S210), A190 (= A211), D210 (= D233), R211 (≠ T234), V255 (= V275), S256 (= S276), R257 (≠ A277), L278 (≠ M298), A279 (= A299), N280 (= N300), N311 (= N332)
1xcoD Crystal structure of a phosphotransacetylase from bacillus subtilis in complex with acetylphosphate (see paper)
28% identity, 42% coverage: 439:762/764 of query aligns to 3:324/325 of 1xcoD